Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00637 ATGGCAATAACTTCAAAGATAATGTCCCTAACATTATGCATGTTTTTATGGCAATTTGCATCTCTTGCATTATTATCAGCATCATCAACTTCTTCCTCCATAGACACAATTTGCAACCTCACACCTTATCCAACATTTTGCAAATCCAATTCCCCTTCTAATGTCCAAGGAGGTGACATTCATGAGTATGGCCGTTTTTACACAAACAAGTCCCTGTCATCATCAAGGGATGTTCTCTCATTACTCTCTACCTACTTACAATCTCCCTCCAAATTCTCCCAGTCAACGATTCTCGCCCTTGAAGATTGCCACCTCTTAGTTGACCTCAACATAGATTTCTGGACCAAGACTCTACAAACTGTAGACACCACAAACAGCACCCTTAATAGTTCCGAGGCTGAAAACCTTCTTACCATGATTAGTGCTACATTAACCAATCTCGATACCTGCTTAGAAAGCCTTAAAGAAGCCACGTCATCAACCCCTGATGACAACCTAGTAAGCCATGTTTCAAACGGAACCATGTTTTCCAGCATATCTCTTGCACTCTTTAAACGGGGTTGGACTTCCAGCATAACCACACAAAAGAGTCGAAAGCTGTTTTCTCAAAGAAATGACGCTTACGCGTGGGAACAGAGGGTTTACGAGATAATCAGAAAGAGAGGGAGAAAGCTGCTTCAGAGTGCTCCTGACGGTGTTGTTGTGAACCAAACGGTGGTGGTGAATCCTGATGGCTCTGGAAACTTCACAACTATCAACGATGCGGTGGCTGCGGCACCCAACAACACCGGTGGTGTCAATGGTTTCTTTGTGATTTATGTGGTTGCAGGAGTGTACGAAGAGTATGTATCTATTCCAAAATACAAGCAGTACTTGATGATGATCGGTGATGGTATCAACAAGACCATAATCACCGGCAATCACAGCGCCGGTACTGGCTACACTACCTTCAATTCTTATTCATTTGCTGTGGTTGCGCAAGGATTCGTGGCTATGAATATAACGTTTCGCAACACAGCAGGAGCAAGCAATTACCAAGCGGTGGCTCTTAGAAGCGGAGCAGATCTATCCGCATTCTACAATTGCAGCTTCGAAGGGTACCAAGACACTTTATACACACATTCAATGAGACAATTCTACAGAGATTGCGACATTTACGGCACAGTTGACTTCATATTTGGCAACGCAGCAGTTGTGTTGCAAAACTGTAACATTTTGCCACGCCTCCCAATGAGTGGCCAGTACAACACCATCACAGCACAGGGCAGAACTGACATTAACCAAAACACAGGAACATCTGTACACAACTGTACAATAACCGCCGCCACCGACTTGGGCACCACTAAAACGTATCTTGGGAGGCCATGGAAGGAGTATTCAAGAACGGTTTACATGCAGTCTTTCATGGACAGTTTGATTGATCCTGCTGGTTGGGCAGAGTGGTCAGGGACATTGTATTTGGACACACTTTATTATGCGGAATATGATAATTGGGGTCCTGGATCTAACACTAGTAATAGGGTCACTTGGGCAGGCTACCATGTCATTAATGCCACTGATGCACAGAATTTCACAGTTTCTAATTTCATATCCGGTGCTGCATGGTTACCTCCTACTGGAGTCCCCTACTTTCTTGATTTAATTTGA 1647 0.4396 MAITSKIMSLTLCMFLWQFASLALLSASSTSSSIDTICNLTPYPTFCKSNSPSNVQGGDIHEYGRFYTNKSLSSSRDVLSLLSTYLQSPSKFSQSTILALEDCHLLVDLNIDFWTKTLQTVDTTNSTLNSSEAENLLTMISATLTNLDTCLESLKEATSSTPDDNLVSHVSNGTMFSSISLALFKRGWTSSITTQKSRKLFSQRNDAYAWEQRVYEIIRKRGRKLLQSAPDGVVVNQTVVVNPDGSGNFTTINDAVAAAPNNTGGVNGFFVIYVVAGVYEEYVSIPKYKQYLMMIGDGINKTIITGNHSAGTGYTTFNSYSFAVVAQGFVAMNITFRNTAGASNYQAVALRSGADLSAFYNCSFEGYQDTLYTHSMRQFYRDCDIYGTVDFIFGNAAVVLQNCNILPRLPMSGQYNTITAQGRTDINQNTGTSVHNCTITAATDLGTTKTYLGRPWKEYSRTVYMQSFMDSLIDPAGWAEWSGTLYLDTLYYAEYDNWGPGSNTSNRVTWAGYHVINATDAQNFTVSNFISGAAWLPPTGVPYFLDLI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00637 548 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Arst6g00637 548 CDD PMEI-like_3 36 189 - -
Arst6g00637 548 NCBIfam pectinesterase inhibitor domain 6 185 IPR006501 GO:0004857
Arst6g00637 548 Gene3D - 232 547 IPR012334 -
Arst6g00637 548 SUPERFAMILY Pectin lyase-like 234 545 IPR011050 -
Arst6g00637 548 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 186 IPR035513 -
Arst6g00637 548 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Arst6g00637 548 PANTHER PECTINESTERASE 18 537 - -
Arst6g00637 548 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 186 IPR035513 -
Arst6g00637 548 FunFam Pectinesterase 233 547 - -
Arst6g00637 548 Pfam Pectinesterase 239 532 IPR000070 GO:0030599|GO:0042545
Arst6g00637 548 SMART PMEI_2 29 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00637 Arst-Chr6 5620556 5623280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00637 10 548 Carbohydrate Esterase AT4G02330 52.098 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00637 K01051 - gmx:100801141 780.785