Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00636 ATGGCTTTGCTTAATCTCTTTTTCATCCTCATGCTTTTACCCTCATCATTTGAGTCTTCACTTTCATCAGGCATCGAAACCCAAGACCTTAACTCCATGATTGCACAAGCCTGTATGAACATCGAAAACCAAAACTCATGCCTCGCCAACATCCAAAACGAGCTCGTCAAGATCGGCCCTCCAAGCCCCACTTCCGTGTTGAGTGCAGCACTCGGTGCCACGATCAACGAAGCCAGGGGGGCCATCGACAAGATCACAAAGTTCACCACGTTCTCGGTGAGCAACCGCGAGCAACTAGCCATAGAAGACTGCAAGGAGCTTCTAGACTATTCCGTTTCGGAGCTGGCATGGTCCATGGGAGAGATGAGAAGAATCCGTGGCGGAGATACAAGCGCGCAATACGAGGGAAACCTGGAAGCGTGGCTAAGTGCAGCTCTGAGCAACCAAGATACTTGCATTGAAGGGTTTGAAGGTACGGACAGGCGCCTCGAGAGTTACATAAGCGGAAGCTTAACGCAAGTTACGCAGCTTATAAGCAATGTGTTATCCCTCTACACTCAACTCCATAAATTACCATTCAGCCCTCCCAGAAAGACTAATACTCTTAATGTCACGACGGTTGTTGATGAGTTTCCCGACTGGATGAGCGACGGTGACGAGCAGCTGCTTAAGGGGAAGTCGCCCCCGCATGGTCGTGCGGATGCTGTGGTGGCGTTGGATGGGAGTGGGCATTTCCGGAGCATCATGGAGGCCGTTAATGCGGCTCCGAGTCATAGTAACACGAGGTATGTCATATACGTGAAGCAGGGGTTGTACAGGGAGAACGTTGATATGAAGAAAAAGATGACCAACATTATGCTCGTTGGTGATGGTATTGGCAGAACCATTCTCACCAGCAACCGCAACTTCATGCAAGGATGGACTACTTTTAGAACTGCTACACTTGCTGTATCCGGGAAGGGATTCATTGCAAGGGACATGACATTCCGCAACACAGCTGGACCAGTGAACCACCAAGCAGTGGCACTTCGTGTGGACTCTGACCAATCAGCGTTCTACAGGTGTAGCATCGAAGGATTCCAAGACACACTTTACGCTCACTCACTGCGTCAATTTTACCGAGAATGTGAAATTTACGGTACCATTGACTTCATCTTTGGCAACGGTGCAGCAGTGTTGCAAAACTGCAAGATCTATACGAGAGTCCCTCTCCCGTTACAAAAGGTTACCATCACGGCCCAAGGAAGAAAAAGCCCACACCAAAGCACAGGCTTCACAATCCAAGATAGCTTTATTCTAGCAACTCAGCCCACTTATCTGGGCCGGCCCTGGAAGGAGTACTCAAGAACAGTTTACATAAACACCTACATGAGTGCGCACGTGCAGCCTCAAGGGTGGCTTGAGTGGTTTGGGAACTTTGCATTGAACACATTGTGGTACGGTGAGTATAGGAATTATGGGCCTGGGTCAGCCCTTGGTGGAAGGGTCAAATGGCCCGGGTATCATGTTATTAAGAATCCTGCTGCAGCTAGTTACTTTACGGTTCAGCGGTTCATTAACGGTAACTCATGGTTGCCAAGGACAGGTGTCAAGTTCACTTCAGGCTTGACCAATTGA 1617 0.4923 MALLNLFFILMLLPSSFESSLSSGIETQDLNSMIAQACMNIENQNSCLANIQNELVKIGPPSPTSVLSAALGATINEARGAIDKITKFTTFSVSNREQLAIEDCKELLDYSVSELAWSMGEMRRIRGGDTSAQYEGNLEAWLSAALSNQDTCIEGFEGTDRRLESYISGSLTQVTQLISNVLSLYTQLHKLPFSPPRKTNTLNVTTVVDEFPDWMSDGDEQLLKGKSPPHGRADAVVALDGSGHFRSIMEAVNAAPSHSNTRYVIYVKQGLYRENVDMKKKMTNIMLVGDGIGRTILTSNRNFMQGWTTFRTATLAVSGKGFIARDMTFRNTAGPVNHQAVALRVDSDQSAFYRCSIEGFQDTLYAHSLRQFYRECEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPHQSTGFTIQDSFILATQPTYLGRPWKEYSRTVYINTYMSAHVQPQGWLEWFGNFALNTLWYGEYRNYGPGSALGGRVKWPGYHVIKNPAAASYFTVQRFINGNSWLPRTGVKFTSGLTN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00636 538 NCBIfam pectinesterase inhibitor domain 4 189 IPR006501 GO:0004857
Arst6g00636 538 Gene3D - 230 536 IPR012334 -
Arst6g00636 538 Pfam Pectinesterase 234 522 IPR000070 GO:0030599|GO:0042545
Arst6g00636 538 SUPERFAMILY Pectin lyase-like 233 535 IPR011050 -
Arst6g00636 538 Pfam Plant invertase/pectin methylesterase inhibitor 33 184 IPR006501 GO:0004857
Arst6g00636 538 SMART PMEI_2 29 184 IPR006501 GO:0004857
Arst6g00636 538 PANTHER PECTINESTERASE 12 526 - -
Arst6g00636 538 FunFam Pectinesterase 229 536 - -
Arst6g00636 538 FunFam Pectinesterase 31 190 - -
Arst6g00636 538 CDD PMEI-like_3 37 190 - -
Arst6g00636 538 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 189 IPR035513 -
Arst6g00636 538 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 189 IPR035513 -
Arst6g00636 538 ProSitePatterns Pectinesterase signature 2. 378 387 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00636 Arst-Chr6 5594173 5596517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00636 1 538 Carbohydrate Esterase AT3G05620 60.617 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00636 K01051 - gmx:100810565 902.894