Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00608 ATGATGCCACCTATGCTAGAACAGGTGATGCCACGTATGTTAGAACAGGTGATTCCACCTATACTGCAGCGTTACCTACCTTCCCCATGTGATGGATTATCGGTGAGGGGGCAGATTAGTCCAGCAGCTGGTAGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTGCAACCATTTTCACACAGATCAACATCACAGCAGAGGACAGTTCCCCGCTCCAGGTTGCGTTGTGTGATGCCACGATTCAGAACAGCAAGGTAACAAAGGGAGATGGTCCCTCCTTGAAGGTCCAGCTGTGTGTCCTGAAGGCTGATTTTGAAAGTGAGGATTGGACTGCTGAGGAATTCAATAAAAACATAGAAAGTCCAAGAGAAGGAAAAGGACCATTACTCAAGGGAGACACGGTTATTACCATGGAAAATGGAGTTGGCTTCTTCAAGAATGTTGAGTTTACTGATAACTCTTGCTGGACAAGAAGCGGCAAGTTCCGGCTTGGAATTAAGGTACTGTCATCGAATTCAGACATCAAGGAAGCAAGAAGCGAGCGTATAAGGGTGAAGGATAAGCGAGGAGTGGCAAATGAGAAACCGGATCGTCCTTCATTGGATGACAAGGTGAGTTGTCTGCATAAGATAGCGAAAAATGGTCCGATCCGCAAGCAGTTGTCCTCCAATGGAATCAAAACTGTGAAGGATCTGTTGCGCTTGCTCACAACTGACCAAGCTTCACTAAAACAGAAAACCGGCAACATTCCGGGGAAGTCATGGGAGAAGATTATTGAGCATGCCAAGTCTTGTGCCATAGATAATGATGAGCGCTACATCTATCAATATTTCACAGGAACAGCAGAGCAACCAATAGCAGCATCCCTTGTCTTAAATTGCATCTATGAGCCTGTGGCGATTTCATTTGATGGCCAAAACTTTTGCAGCCTAGAGTCTTTGAATTCGGAAGGCAAGCGTTGGGTGGAAACTGTAAAGCGGCAAGCATACAAGAACTTGAAGGATTTGAAGCCATTTGGCGCAAGTTCAGCGGGTCAATCTCTGGAAAACTTCGATTTCCCAGTTTCTCATCAGCAAGGGCAAGCACAAATGGTTCAAGCATCGGCATCGACAGCATCAGGCGCACAGAGTGTTAACGAGCAAGTAGGGTGTTCCAGTCAACATCAGGTGGGACGGGAAGAGTTCGTTGGCGATAGCGGATGGAGCAACATCAACATGGTTGATCCGTTTCCAAATTACTCGGACCCAGTTTACCCCTTTTACTATGTTGCAGGTGATTATGGGGCAACATCATCCAACGATTCATTCCCTGTCTTTGATATGCATTGGTCAAGCAAAGGTGGGTGCAACACTGTGTGGGCTAAAATCCGAACTGCTGTCATTCGTAATGTTCTTAAATGGACCATTCTCTATGCCGCCAAAAGGAAGCCCAAGCTTCTTGTTCCCTATCAGTAA 1464 0.4631 MMPPMLEQVMPRMLEQVIPPILQRYLPSPCDGLSVRGQISPAAGRGRSLQLCLMKGLPATIFTQINITAEDSSPLQVALCDATIQNSKVTKGDGPSLKVQLCVLKADFESEDWTAEEFNKNIESPREGKGPLLKGDTVITMENGVGFFKNVEFTDNSCWTRSGKFRLGIKVLSSNSDIKEARSERIRVKDKRGVANEKPDRPSLDDKVSCLHKIAKNGPIRKQLSSNGIKTVKDLLRLLTTDQASLKQKTGNIPGKSWEKIIEHAKSCAIDNDERYIYQYFTGTAEQPIAASLVLNCIYEPVAISFDGQNFCSLESLNSEGKRWVETVKRQAYKNLKDLKPFGASSAGQSLENFDFPVSHQQGQAQMVQASASTASGAQSVNEQVGCSSQHQVGREEFVGDSGWSNINMVDPFPNYSDPVYPFYYVAGDYGATSSNDSFPVFDMHWSSKGGCNTVWAKIRTAVIRNVLKWTILYAAKRKPKLLVPYQ 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00608 487 Pfam Calmodulin binding protein C-terminal domain 292 341 IPR046829 -
Arst6g00608 487 Pfam Calmodulin binding protein central domain 203 268 IPR046830 -
Arst6g00608 487 PANTHER OS02G0177800 PROTEIN 4 385 IPR012416 GO:0005516
Arst6g00608 487 Pfam Calmodulin binding protein-like N-terminal domain 49 191 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00608 Arst-Chr6 5355832 5358599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00608 6 384 Calmodulin-binding Proteins AT5G26920 36.292 1.83e-62 207