Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00607 ATGGCACCAAACAAGAGAGGATCATCAAGCGATGAGGGTAATGATGAGAGAGACCTTCAGCTCCCTCTTTGTAAACGAAAAGCAGCACTACCAGACACTCGTATTTCTGCTTCCGGTAGTGGTTCCACCAACATGGCGTTGATGTTGGAACCTGTAATTCGGAAAGTGTTACAGGAGATGATGCCACCTATGCTAGAACAGGTGATGCCACGTATGTTAGAACAGGTGATTCCACCTATACTGCAGCGTTACCTACCTTCCCCATGGGGGCAGATTAGTCCAGCAGCTGGTAGAGGCAGATCATTGCAGTTATGTCTGATGAAAGGGTTGCCTGCAACCATTTTCACACAGATCAACATCACAGCAGAGGACAGTTCCCCGCTCCAGGTTGCGTTGTGTGATGCCACGATTCAGAACAGCAAGGTAACAAAGGGAGATGGTCCCTCCTTGAAGGTCCAGCTGTGTGTCCTGAAGGCTGATTTTGAAAGTGAGGATTGGACTGCTGAGGAATTCAATAAAAACATAGAAAGTCCAAGAGAAGGAAAAGGACCATTACTCAAGGGAGACACGGTTATTACCATGGAAAATGGAGTTGGCTTCTTCAAGAATGTTGAGTTTACTGATAACTCTTGCTGGACAAGAAGCGGCAAGTTCCGGCTTGGAATTAAGGTACTGTCATCGAATTCAGACATCAAGGAAGCAAGAAGCGAGCGTATAAGGGTGAAGGATAAGCGAGGAGTGGCAAATGAGAAACCGGATCGTCCTTCATTGGATGACAAGGTGAGTTGTCTGCATAAGATAGCGAAAAATGGTCCGATCCGCAAGCAGTTGTCCTCCAATGGAATCAAAACTGTGAAGGATCTGTTGCGCTTGCTCACAACTGACCAAGCTTCACTAAAACAGAAAACCGGCAACATTCCGGGGAAGTCATGGGAGAAGATTATTGAGCATGCCAAGTCTTGTGCCATAGATAATGATGAGCGCTACATCTATCAATATTTCACAGGAACAGCAGAGCAACCAATAGCAGCATCCCTTGTCTTAAATTGCATCTATGAGCCTGTGGCGATTTCATTTGATGGCCAAAACTTTTGCAGCCTAGAGTCTTTGAATTCGGAAGGCAAGCGTTGGGTGGAAACTGTAAAGCGGCAAGCATACAAGAACTTGAAGGATTTGAAGCCATTTGGCGCAAGTTCAGCGGGTCAATCTCTGGAAAACTTCGATTTCCCAGTTTCTCATCAGCAAGGGCAAGCACAAATGGTTCAAGCATCGGCATCGACAGCATCAGGCGCACAGAGTGTTAACGAGCAAGTAGGGTGTTCCAGTCAACATCAGGTGGGACGGGAAGAGTTCGTTGGCGATAGCGGATGGAGCAACATCAACATGGTTGATCCGTTTCCAAATTACTCGGACCCAGTTTACCCCTTTTACTATGTTGCAGGTGATTATGGGGCAACATCATCCAACGATTCATTCCCTGTCTTTGATATGCATTGGTCAAGCAAAGGTGGGTGCAACACTGTGTGGGCTAAAATCCGAACTGCTGTCATTCGTAATGTTCTTAAATGGACCATTCTCTATGCCGCCAAAAGGAAGCCCAAGCTTCTTGTTCCCTATCAGTAA 1623 0.464 MAPNKRGSSSDEGNDERDLQLPLCKRKAALPDTRISASGSGSTNMALMLEPVIRKVLQEMMPPMLEQVMPRMLEQVIPPILQRYLPSPWGQISPAAGRGRSLQLCLMKGLPATIFTQINITAEDSSPLQVALCDATIQNSKVTKGDGPSLKVQLCVLKADFESEDWTAEEFNKNIESPREGKGPLLKGDTVITMENGVGFFKNVEFTDNSCWTRSGKFRLGIKVLSSNSDIKEARSERIRVKDKRGVANEKPDRPSLDDKVSCLHKIAKNGPIRKQLSSNGIKTVKDLLRLLTTDQASLKQKTGNIPGKSWEKIIEHAKSCAIDNDERYIYQYFTGTAEQPIAASLVLNCIYEPVAISFDGQNFCSLESLNSEGKRWVETVKRQAYKNLKDLKPFGASSAGQSLENFDFPVSHQQGQAQMVQASASTASGAQSVNEQVGCSSQHQVGREEFVGDSGWSNINMVDPFPNYSDPVYPFYYVAGDYGATSSNDSFPVFDMHWSSKGGCNTVWAKIRTAVIRNVLKWTILYAAKRKPKLLVPYQ 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00607 540 Pfam Calmodulin binding protein central domain 256 321 IPR046830 -
Arst6g00607 540 Pfam Calmodulin binding protein-like N-terminal domain 102 244 IPR046831 -
Arst6g00607 540 Pfam Calmodulin binding protein C-terminal domain 345 394 IPR046829 -
Arst6g00607 540 PANTHER OS02G0177800 PROTEIN 44 438 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00607 Arst-Chr6 5355832 5358599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00607 47 437 Calmodulin-binding Proteins AT5G26920 34.739 2.48e-61 206