Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00545 ATGAGTGGTGGATCAACTAGCTTCTCTTGTTCCTTTTCTTCCTTCAGCTATGGATGGACCTATGATGTTTTCATCAGTTTCAGGGGCACCGATACTCGCCATGGTTTCACCGGTCATCTCTACAGTGCACTCTCTCACAGGGGAATCCGCACCTTCATAGACGATCAGGACCTTCAAAGAGGGCACGAGATCACACCCTCTCTTCTCAAGGCAATCCAAGAATCCAGGATTGCTACCCTTGTCTTCTCTGCAAACTATGCATCTTCCTCTTTTTGCTTGGATGAACTTGCCACCATCATCAACTGTGTCAAGTCCAAGGGTAGGTTGGTTTTGCCGGTTTTCTATGGCGTGGATCCCAGTGATGTGAGGCATCAGAGAGGGGCTTATGGTGAAGCTCTCGCTACGCATGAGGAAAGGTTCAAGGATAATTTGGACATTGTGCATAATTGGAGGAATGCTCTTCATCAAGCTGCTAACTTGTCCGGTTGGCATTTCAAACAAGGGGATGGATATGAGTACAAGTTTATTGGAAAGATTGTGGAAGTCGTCTCAAGAAATATTAGACGAGGCGTTTTGCCGGTTGCTGATTACCCGGTTGGACTGGAGTCCAAGGTGGTGCAAGTAAATTCCCTTCTGGAGGTTGGATCTAATGATGGAGTCCGTATGATTGGGATCCATGGAATTGGTGGAATAGGTAAGACCACACTTGCTCTAGCTGTATATAACTGCATTGCGGATCATTTTGAAGGTTTGTGTTTTCTTCAAAGGGTGAGAGAAAGTTCAAGTAGACATGGATTGGTACATCTTCAGAATATCCTTCTTTCAGAATTATTAGGTGAGAATAAATTTAAATCAACCAGTGTTCAACAAGGAATTTCAATAATACAGCATAGGCTCCAGCAAAAGAAGATACTTCTGATTTTGGATGATGTCGACAGACAGGAGCAATTGCAAGCTCTTGCTGGAAATCCTGACTGGTTTGGTCCTGGAAGTAGAGTCATCATTACGACGCGGGACACACATTTGCTCACATGTCATGGGGTTGAAAGATCATATGAGTTGGAAGGTTTAAATTATGCAGATGCTGTTGAATTGCTTAGTTGGAAGGCTTTTAAAACCATTGATGTCAGTCCAAGTTATGTGGATGTTTTGAATCATGCAGTGACTTATGCTCATGGACTTCCATTGGCTTTAGAAGTAATAGGTTCCAACATGTTTGGAAAAAGTATCGGAGAATGGAAATCTGCAATAAATCAATATGAAAGAATTCCTAATAAGAACATCCATGAGATACTTAAAGTAAGTTTTGATGCTTTGGAGGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCTTGTTGCTTTAGAGGATATACATTAGCAGAAGTTGAAGATATACTTCATGCTCATCATGGTGCCTGTATGAAATATCATATTGGTGTTTTGGTTGAAAAATCTCTCATAAAGATTCAAGAGCTTGGTGAGATCACATTACATGACCTGATAGAGCACATGGGTAAAGAACTTGTCCGACAGGAGTCACCAAAAGTGCTTGGGAAACGTAGCAGGTTATGGTGGCATGAAGATATAGTTCAAGTTTTGGAAAACAATCAAGGAACTAGCGAAATAGAAATCATTCATCTGAATTTTCCCTCAACCGAGGATGAAGAAGAAGAAAAAGTAGAATGGGATGGGAAGGCATTCAAGAAGATGAAAAATCTCAAAACACTCATTATAAAAAATGGTTATTTTTCTGAAGGTCCCAGACATTTTCCAAATAGTTTAAGAGTTCTGGAATGGTGGAGATATCCTTCTGAATGCTTACCATCTAATTTTCATCCAAAGAAACTTTCCATATTCAAGTTACCGAATAGTTGCTTCTTATCGCTCTATTTGGCTAGCTTATTGAAGGCAACGAAGTTTGCAACCCTAAAAGTTTTGAATTTCGACAACAATAAATATTTAACACAGCTACCTGATATATCTGGTCTTCCAAATCTACAAAAGTTGTCATTTGAGCATTGTGAGAATTTAATTTCAGTCCACAATTCAGTTGGTTTCCTGAAACAACTTAAAAGTTTGAGTGCTTATTGTTGCGGTAAGCTTACAAGTTTTCCGTGCATCAACTTGCCTTCTCTTGAAGAACTCAGACTTTCAGGATGCTCAAGTCTTGAGAATTTTCCTGAAATACTAGAAAAAATGGAAAAGATAACAGGACTTCATTTGGAGCACACTGGAATAAAAGCTTTGCCACTTTCGTTTCATAAGTTTTCTCGGCTGCAGCGGTTGACTTTGAGTGAAAATAAATATTGTAAGATACCAAGTGCCATTGTCATGATGCCTGAACTGGTTATGTTGACTTTCACACCACTTGAGAACGACCGGCTATCGATAGAGGGTGAAGAAACAGTGAGCTCAATGGTGTCTTCAAATGTAGAATATCTAAGTATCTCACGCTGCAATCTGTCGGATGATTTTTTCCCTCTAGGTCTTGCATGGTTTGCTAATGTGAAAGAACTAGACCTACGAGGCAATGATTTCACATTTCTTCCTGAATGCATCAAAGAATGTCACTTTCTGAGGAAGCTTAGTGTGGACTATTGCCCAAATCTTAAGGAAATTAGAGGGATTCCACCAAATTTGGAACATTTCTCAGCAATAGGCTGCAAATCCTGGACTCCCTCATGCACGAGCATGTTAACGAATCAGGAACTGCATGAAGCCGGAAACACAAGGTTTGCTTTGCCCGGGTCAAGAATTCCAGCATGGTTTGAGCACCACAGCAAGGGAGCATCAATTTCTTTCTGGTTTCGCAACAAGTTCCCTGCCATAGCTCTCTTTCTTGCAATTGGCCTGACGGATAAGGACACAGTTTTCGTAAGCCCCGACGTGACCATCAATGGCAAGAAAGGTTTTCCTGAATTCTGGACTGAAATGGAACAGATATTTCTCTTTGATCTACAGATGATACAATGTGATTTGGGTGAGACACTTTCAGAAAACGAATGGAATCATGCAGAGATTTCGTGCACCGCTAGTGATCATTTTCTTTTTATAGGAGAAAAGTTCCCAGTCGAGCCGTTTGCAAAAGAAATCGGAATCCATGTATTCAGGCAAAAAAGTACTATGGAGGATATTCGATTCACCGATCCTTATAAAAGAAGAAAATTAGATGAAGGTCTCTGTATATAG 3189 0.4039 MSGGSTSFSCSFSSFSYGWTYDVFISFRGTDTRHGFTGHLYSALSHRGIRTFIDDQDLQRGHEITPSLLKAIQESRIATLVFSANYASSSFCLDELATIINCVKSKGRLVLPVFYGVDPSDVRHQRGAYGEALATHEERFKDNLDIVHNWRNALHQAANLSGWHFKQGDGYEYKFIGKIVEVVSRNIRRGVLPVADYPVGLESKVVQVNSLLEVGSNDGVRMIGIHGIGGIGKTTLALAVYNCIADHFEGLCFLQRVRESSSRHGLVHLQNILLSELLGENKFKSTSVQQGISIIQHRLQQKKILLILDDVDRQEQLQALAGNPDWFGPGSRVIITTRDTHLLTCHGVERSYELEGLNYADAVELLSWKAFKTIDVSPSYVDVLNHAVTYAHGLPLALEVIGSNMFGKSIGEWKSAINQYERIPNKNIHEILKVSFDALEEEEKSVFLDIACCFRGYTLAEVEDILHAHHGACMKYHIGVLVEKSLIKIQELGEITLHDLIEHMGKELVRQESPKVLGKRSRLWWHEDIVQVLENNQGTSEIEIIHLNFPSTEDEEEEKVEWDGKAFKKMKNLKTLIIKNGYFSEGPRHFPNSLRVLEWWRYPSECLPSNFHPKKLSIFKLPNSCFLSLYLASLLKATKFATLKVLNFDNNKYLTQLPDISGLPNLQKLSFEHCENLISVHNSVGFLKQLKSLSAYCCGKLTSFPCINLPSLEELRLSGCSSLENFPEILEKMEKITGLHLEHTGIKALPLSFHKFSRLQRLTLSENKYCKIPSAIVMMPELVMLTFTPLENDRLSIEGEETVSSMVSSNVEYLSISRCNLSDDFFPLGLAWFANVKELDLRGNDFTFLPECIKECHFLRKLSVDYCPNLKEIRGIPPNLEHFSAIGCKSWTPSCTSMLTNQELHEAGNTRFALPGSRIPAWFEHHSKGASISFWFRNKFPAIALFLAIGLTDKDTVFVSPDVTINGKKGFPEFWTEMEQIFLFDLQMIQCDLGETLSENEWNHAEISCTASDHFLFIGEKFPVEPFAKEIGIHVFRQKSTMEDIRFTDPYKRRKLDEGLCI 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00545 1062 Gene3D Ribonuclease Inhibitor 724 911 IPR032675 -
Arst6g00545 1062 ProSiteProfiles Leucine-rich repeat profile. 642 664 IPR001611 GO:0005515
Arst6g00545 1062 Pfam TIR domain 21 183 IPR000157 GO:0007165
Arst6g00545 1062 Gene3D - 15 189 IPR035897 -
Arst6g00545 1062 SUPERFAMILY L domain-like 514 909 - -
Arst6g00545 1062 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 189 - -
Arst6g00545 1062 PRINTS Disease resistance protein signature 391 405 - -
Arst6g00545 1062 PRINTS Disease resistance protein signature 222 237 - -
Arst6g00545 1062 PRINTS Disease resistance protein signature 707 723 - -
Arst6g00545 1062 PRINTS Disease resistance protein signature 298 312 - -
Arst6g00545 1062 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 163 IPR035897 -
Arst6g00545 1062 Pfam NB-ARC domain 209 432 IPR002182 GO:0043531
Arst6g00545 1062 Gene3D - 190 351 IPR027417 -
Arst6g00545 1062 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 728 IPR044974 GO:0006952
Arst6g00545 1062 SMART till_3 20 160 IPR000157 GO:0007165
Arst6g00545 1062 Gene3D Ribonuclease Inhibitor 546 723 IPR032675 -
Arst6g00545 1062 Gene3D - 356 440 IPR042197 -
Arst6g00545 1062 ProSiteProfiles TIR domain profile. 19 187 IPR000157 GO:0007165
Arst6g00545 1062 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 450 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00545 Arst-Chr6 4872162 4876641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00545 12 839 WRKY Transcription Factor Family AT4G12020 29.377 2.70e-77 277