Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00540 ATGACGGATTCGCAGTCCAATTCAGAGATTTTCAGTGTTCGGATTGTCTCCATCGACTATTACATGGCTCCGCCGATCCAAGGCGCCGATATCTGTTACAGCAGCTTCCACGGGGGAAAAGTGAAGGAGGTTCCTGTTATAAGAGTGTATGGTTCTACTCCTTCAGGCCAGAAGACTTGCTTGCACATTCACCGAGCCTTGCCATATATGTATGTGCCATGTTCGGATATACCACTTCAACCAGACCAAGAAGGTGATGCATACACGTATAAGGTTGCTGCTTCTCTTGAGAAAGCCTTGCAGCTTAAAGGCAGTGCTGGTTCAACAAGGCAGCATGTGCATGGCTGCAGCCTTGTACGAGCAAGAAGATTCTATGGTTACCACTCGTTTGAGGAGTTATTTGTTAAGATATACCTATATTATCCGCAAGATGTCTCCCATGCTGCTAATCTTCTCTTGGCTGGTGCTGTTCTTGACAAATGTTTACAACCTCATGAATCACATATTCCCTATATTCTTCAGTTTTTGGTATGTTCTTTCATATGA 546 0.4432 MTDSQSNSEIFSVRIVSIDYYMAPPIQGADICYSSFHGGKVKEVPVIRVYGSTPSGQKTCLHIHRALPYMYVPCSDIPLQPDQEGDAYTYKVAASLEKALQLKGSAGSTRQHVHGCSLVRARRFYGYHSFEELFVKIYLYYPQDVSHAANLLLAGAVLDKCLQPHESHIPYILQFLVCSFI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00540 181 FunFam DNA polymerase 30 180 - -
Arst6g00540 181 SUPERFAMILY Ribonuclease H-like 27 178 IPR012337 -
Arst6g00540 181 PANTHER DNA POLYMERASE ZETA CATALYTIC SUBUNIT 5 177 IPR030559 GO:0006281|GO:0016035|GO:0019985
Arst6g00540 181 Gene3D DNA Polymerase, chain B, domain 1 30 177 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00540 39 177 Core DNA Replication Machinery Family AT5G63960 26.389 3.70e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00540 K02350 - adu:127739759 374.785