Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00533 ATGCAAGATATATTCGGATCAGTTCGGCGATCGCTGGTGTTCCGTGCTTCGCCTGAGAACGAAGAGCACTCGCTGAGAGGAACCCTAGTTGATAAGATCGGTTACTGTATACGCAATTCCAGAGTCTTCTCTAAGCCCTCACTGTCGCCACCGTCCTTGCCGCCGATTCCCAAGGACGTTGCTGCTGCTGCTCCGCCGCCGCCTACGATCCGATGGCGCAAGGGCGAGTTGATCGGTTGCGGCGCATTTGGCCAAGTTTATGTTGGAATGAATCTCGATTCTGGAGAACTTTTAGCAGTTAAACAGGTTTTGATTGCAGCGAGTAGTGCTTCGAAGGAGAAGGCACAGGCTCATGTAAAAGAGCTCGAGGAAGAAGTTAAGCTTCTTAAAGATCTTTCACATCCCAACATTGTTAGATATTTGGGTACAGTTAGAGAGGAGGACACCTTAAATATTCTCCTGGAGTTTGTCCCTGGTGGATCCATATCATCACTGTTGGGGAAATTCGGAGCTTTCCCTGAGGCAGTCATAAGAACTTACACAAAGCAGTTGCTGCTTGGACTTGAGTACTTGCACAAAAATGGAATAATGCACAGAGATATTAAGGGGGCCAATATTCTTGTAGATAATAAAGGTTGCATTAAACTTGCAGATTTTGGGGCCTCCAAACAAGTTGTTGAGCTGGCTACTATTTCGGGTGCCAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAGGTTATTCTCCAGACTGGACATAGCTTCTCTGCTGACATATGGAGTGTGGGTTGCACTGTGATTGAGATGGCCACTGGAAAGCCTCCCTGGAGCCAACAATACCAACAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACTAAGTCTCATCCGCCAATCCCTGATCATCTCTCTGTTGCAGCCAAAGATTTTCTGCTAAAATGTTTGCAGAAGGAACCATATTTGAGGCCATCGGCATCAGAACTACTGCAGCATCCCTTTGTTACTGGTGAACCTATGGATTCTCTTCCTGTTTCATCTACTGTCGTGAAAAATTTGGAAACTTCATCTTCTTGTGCTCCAAATGTTGAATCCTTCCTTCGTTGCTCAAATTTGAATCTTGAGGACTCAGGAAATAAAGAGTTGTGGGGAATTAGCAACGATGATGATGACATGTGTATGATTGATGACGACGAGGAGTTCTCTCAGAATGATGTCAAACAGGAACCTTTGATCTCAGAAAATATTGAGAGCTTCAACCCGATGTCAGATCCCTCTGATGATTGGGTGTGTAAGTTTGATGGAAGTCCGGAATTGGAACATAAAGGAGTCAGTTTTGGCACAGATGAAAATGATAAGTCACTTGGTCACTTAGGGGATTATAACAAGGAGCAGAAAGATTTTTCCTTTCCGAGCGTGCCATCTCTATCAGAGGAAGATGATGAGCTCACGGAGTCAAAAATTCAAGCTTTTTTGGATGAGAAGGCTCTTGAACTGAAGAAGCTGCAGACACCTTTATATGAGGAGTTCTACAACAGTTTAAATATATCTTGTTCACCAAGTGTGATTGATGGAACAAGTGATGAAGCTGCTTCTCGGAAGTTTTTGAAATTACCTCCTAAGAGTAAGTCACCAAGTCGGATACCAAGCACTCCATCTAAAGCAGCTGACAATACTGGAAGTCCTGGAAGTAATGGCAGGTCCTCATCAACTGTTGGCAATGTAAATGATCATAGTTCACAGGACCTTCCATCTTCTCCCCTTAATGAATTTAAAGGGCTGATAGTTGACTCCCAGCAGGAACCTGGTAGCCCAAGACATTTTACTTTCAGTTTAAGCTTTTCGAAACAGAGAGAGTGGAAAGAAGAGCTCGACCAGGAGCTTGAAAGAAAACGAGAATGGAGGCGCCAAGCAGGGGTGGGGTCAAAGACTTCTTCACCAAAGGATAGAGCTTTACATCGGCAGAGAGAGCGGACACGATTTGCTTCTCCCAGCAAATAA 2001 0.4473 MQDIFGSVRRSLVFRASPENEEHSLRGTLVDKIGYCIRNSRVFSKPSLSPPSLPPIPKDVAAAAPPPPTIRWRKGELIGCGAFGQVYVGMNLDSGELLAVKQVLIAASSASKEKAQAHVKELEEEVKLLKDLSHPNIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQQEVAALFHIGTTKSHPPIPDHLSVAAKDFLLKCLQKEPYLRPSASELLQHPFVTGEPMDSLPVSSTVVKNLETSSSCAPNVESFLRCSNLNLEDSGNKELWGISNDDDDMCMIDDDEEFSQNDVKQEPLISENIESFNPMSDPSDDWVCKFDGSPELEHKGVSFGTDENDKSLGHLGDYNKEQKDFSFPSVPSLSEEDDELTESKIQAFLDEKALELKKLQTPLYEEFYNSLNISCSPSVIDGTSDEAASRKFLKLPPKSKSPSRIPSTPSKAADNTGSPGSNGRSSSTVGNVNDHSSQDLPSSPLNEFKGLIVDSQQEPGSPRHFTFSLSFSKQREWKEELDQELERKREWRRQAGVGSKTSSPKDRALHRQRERTRFASPSK 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00533 666 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 54 341 - -
Arst6g00533 666 SMART serkin_6 72 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00533 666 MobiDBLite consensus disorder prediction 442 464 - -
Arst6g00533 666 ProSiteProfiles Protein kinase domain profile. 72 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00533 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Arst6g00533 666 FunFam Mitogen-activated protein kinase kinase kinase 2 71 364 - -
Arst6g00533 666 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Arst6g00533 666 MobiDBLite consensus disorder prediction 534 610 - -
Arst6g00533 666 Pfam Protein kinase domain 73 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00533 666 Coils Coil 617 637 - -
Arst6g00533 666 FunFam Serine/threonine-protein kinase STE11 68 162 - -
Arst6g00533 666 Coils Coil 105 132 - -
Arst6g00533 666 MobiDBLite consensus disorder prediction 634 666 - -
Arst6g00533 666 MobiDBLite consensus disorder prediction 547 587 - -
Arst6g00533 666 CDD STKc_MAPKKK 71 335 - -
Arst6g00533 666 MobiDBLite consensus disorder prediction 647 666 - -
Arst6g00533 666 SUPERFAMILY Protein kinase-like (PK-like) 71 355 IPR011009 -
Arst6g00533 666 MobiDBLite consensus disorder prediction 442 481 - -
Arst6g00533 666 Gene3D Transferase(Phosphotransferase) domain 1 71 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00533 Arst-Chr6 4780361 4785004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00533 1 666 MAP Kinase Kinase Kinase AT1G54960 57.542 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst6g00533 Pkinase 3.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00533 K20606 - gmx:100807537 1002.66