Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00518 ATGGAAGTAATTAACAGCACCACAACCGCTGTGCCTGCAACCAAGCAAACTTACAAACACACACATTCACATTCACATTCCAATAATGATTTCCCCTCCAAAACCATTCTCATTACCATCACTCTCCTCACCTCTCTTACCCTCTTCTTTGCCATTTTTCTTGTTGCATTCATGCTCCGTCGTCTCAAATCCAAACACTTCGCTTCAAGTAGTCCAGAAGTGAAGGGAGGATGTGTTGATCATCATCATCCAACACCAACAACACCAAATAAATTTCGAGGTGTTCAAGTGTTGACATACAGAGAGATAGAAGTGGCGACAGGTGGAATGAGTGAAGGAAATGTAATTGGGAATGGAGATTCTGGTTTGGTGTACAAAGGAATCCTAAGTGATGGAACTTTGGCAGCAATTAAACTCATGCGAAGGGAAGGGAAGCAAGAAGAGCGTGCCTTCAGAATTGAGGTGGATATCCTAAGCCGTTTGCACTGTCCTTATTTGGTGGAATTGCTAGGCTATTGTGCGGACCATCACCACAGGGTGTTGGTGTTTGAATACATGCCTAATGGAACACTCTATCACCATCTCCACTCTCTTAATTACAATAATCAATCTCAGCCGTTGGATTGGTGGACCAGGATGAGAATAGCCCTTGATTGTGCCATGGCTTTGGAGTTCTTGCATGAACATGCTCTCTCCCCTGTCATACACCGTGACTTCAAGACTGCTAATGTTCTCTTGGATCAAAATTTTCGTGCCAAGGTCTCCCATTTTGGATTGGCCAAGACTGGCTCTGACAAGATCAACGGTCAGATTTCCACCCGCGTGTTAGGGACCACCGGATATCTCGCACCCGAGTATGCATCAACGGGAAAGCTTACTACAAAATCTGATGTATATAGCTATGGCGTGGTTCTTCTGGAAGTGCTAACCGGGCGCGTACCGGTTGATATTGAGCGACCTCCGGGAGAACATGTACTTGTCTCTTGGGCTCTTCCAAGGTTAACAAACAGAGAAAAGGTGGTGGAAATGGTTGACCCTGCTCTTCGAGGACAGTACTCAAAGAAGGATCTAATTCAGGTAGCAGCAATAGCAGCAATGTGCATACAAACAGAAGCAGATTACAGGCCACTAATGACGGATATTGTTCAATCACTGATACCACTTGTTAGGAATCCCTCCTCATCATCTAGTTCCTTAAGATTTCTTAAAAGTCCAACCTATTAA 1224 0.4453 MEVINSTTTAVPATKQTYKHTHSHSHSNNDFPSKTILITITLLTSLTLFFAIFLVAFMLRRLKSKHFASSSPEVKGGCVDHHHPTPTTPNKFRGVQVLTYREIEVATGGMSEGNVIGNGDSGLVYKGILSDGTLAAIKLMRREGKQEERAFRIEVDILSRLHCPYLVELLGYCADHHHRVLVFEYMPNGTLYHHLHSLNYNNQSQPLDWWTRMRIALDCAMALEFLHEHALSPVIHRDFKTANVLLDQNFRAKVSHFGLAKTGSDKINGQISTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLEVLTGRVPVDIERPPGEHVLVSWALPRLTNREKVVEMVDPALRGQYSKKDLIQVAAIAAMCIQTEADYRPLMTDIVQSLIPLVRNPSSSSSSLRFLKSPTY 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00518 407 CDD STKc_IRAK 116 388 - -
Arst6g00518 407 ProSiteProfiles Protein kinase domain profile. 110 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00518 407 PANTHER OS07G0668900 PROTEIN 89 395 - -
Arst6g00518 407 Gene3D Phosphorylase Kinase; domain 1 83 185 - -
Arst6g00518 407 Gene3D Transferase(Phosphotransferase) domain 1 186 399 - -
Arst6g00518 407 Pfam Protein tyrosine and serine/threonine kinase 113 385 IPR001245 GO:0004672|GO:0006468
Arst6g00518 407 SUPERFAMILY Protein kinase-like (PK-like) 84 385 IPR011009 -
Arst6g00518 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Arst6g00518 407 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Arst6g00518 407 FunFam Receptor-like serine/threonine-protein kinase ALE2 186 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00518 Arst-Chr6 4688236 4691761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00518 34 406 Receptor kinase-like Gene Family AT3G58690 55.584 9.77e-149 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Arst6g00518 PK_Tyr_Ser-Thr 3.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00518 - - jre:109008160 551.977