Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00516 ATGGCTGAAAATAAGCAATCCCAATTGAATGGCTCATACTATGGCCCTTCAATTCCTCCAAATAATAACCGTAGAAGAAGAAATTGTTGTTGCCGCATTTTCAACATCTTTTGGAAGATTCTACTATCAATCATAACCCTAATTGTTCTTTTATTCATCATATCCCTTGTCATAGTTCAACCAAGACCCTTCAAATTCTCTGTCACACAAGCAAATCTCACACAATTCAACTACACTAGCACTAATACATTGTTACATTACAAACTTGTACTAAATTTCACTTCACATAACCCAAACAAAAAGCTTGGAATCTACTATGACAAAGTTGAGGGCAATGTGTTCTACCAAGGTTCTAGATTCTCCACAATTGATGTCATCACATGGCTGAATTCTTTCAGACAAGATTCTAACCACACGGATAGGATGAGTGGTGTGTTCAAGGGGACAAAAGTTTTGGTTCTTGATCAAAGTCAACGCTCTAAGTTTGACCAAGACAAGAGAGATGGGGATTTCGATATTTATGTGAAGTTGCATTTTGACATAAGGTTTAGGCTTGGTGATTTTATATTTAATAATATTAACTCAAAAGCTACGGTTAAGTGTGGGATTAAGGTTCCTTTGAGTGATTCTAATGGGAAAGTGGTAGGTGCTAGATTTGAGCCCAAGAAGTGCAATGTTGATATCAAGTGGGTTTAG 696 0.3664 MAENKQSQLNGSYYGPSIPPNNNRRRRNCCCRIFNIFWKILLSIITLIVLLFIISLVIVQPRPFKFSVTQANLTQFNYTSTNTLLHYKLVLNFTSHNPNKKLGIYYDKVEGNVFYQGSRFSTIDVITWLNSFRQDSNHTDRMSGVFKGTKVLVLDQSQRSKFDQDKRDGDFDIYVKLHFDIRFRLGDFIFNNINSKATVKCGIKVPLSDSNGKVVGARFEPKKCNVDIKWV 231
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00516 231 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 17 209 - -
Arst6g00516 231 Pfam Late embryogenesis abundant protein 93 201 IPR004864 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Arst6g00516 Arst-Chr6 4643252 4644040 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00516 58 217 SNARE and Associated Proteins AT1G32270 30.625 2.64e-16 75.1