Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00515 ATGTGCTTGCCTGAGTCAGAGAGAGACATGGCTCTGGAAGCTGTGTTGTATACTAATAACAACATTCAACAACCACTCCCTTCTTCTTCTTATGCAATCAACGACACCAACAACAAGGACTTGGACTTTTTCAACTTCAACAATGATACTGGCCTACACTATTTACTGTCACCGCCACCACCGCCGCCGGAAGAAACAGAAACAACCATGGATACCACATCAACTTGTTCTGAGCGTCCCAAGAGAAGGAGAGGAAAGACAAGAAAGAACAAGGAGGAGATCGAGAACCAAAGAATGACTCACATTGCCGTCGAACGTAACCGACGGAAGCAAATGAATGATTACCTCTCTCTCCTTCGCAATCTCATGCCAGATTCTTACGTTCAAAGGGGCGATCAAGCGTCCATAATAGGGGGTGCTATTAACTATGTGAAGGTGCTTGAGCAGAAACTGCAGTTTCTTGCTGCTACTACTAGCGATGAAGATGGAGGATCTGATCATACAAATAACAAAATTGGAACCATGCCTTTTTCCGAGTTCTTCGGCTTCCCACAAGTGACAGGGAATGCTGATATTGAAGTAACAATGGTGGAAAGCCATGCAAATCTGAAAATAAGGTCAAAGAAAAAGCCCAAGCAGCTCTTGAAGATGGTGTCTAATTTGCAAGCCATGCGTCTCACAATCTTGCATCTTAATGTCACCACCACTAACAATGATATTGTCCTCTATTCTCTCAGCGTTAAGGTGGAAGACGATTGCAAGTTGGAATCAGTGGATGAGATAGCCACGGCTGTGTGTCAAATGATGGAAAACATTCAACATGAGTCTGTTGAATAA 837 0.4361 MCLPESERDMALEAVLYTNNNIQQPLPSSSYAINDTNNKDLDFFNFNNDTGLHYLLSPPPPPPEETETTMDTTSTCSERPKRRRGKTRKNKEEIENQRMTHIAVERNRRKQMNDYLSLLRNLMPDSYVQRGDQASIIGGAINYVKVLEQKLQFLAATTSDEDGGSDHTNNKIGTMPFSEFFGFPQVTGNADIEVTMVESHANLKIRSKKKPKQLLKMVSNLQAMRLTILHLNVTTTNNDIVLYSLSVKVEDDCKLESVDEIATAVCQMMENIQHESVE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00515 278 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 96 157 IPR036638 GO:0046983
Arst6g00515 278 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 96 147 IPR011598 GO:0046983
Arst6g00515 278 Pfam Helix-loop-helix DNA-binding domain 97 147 IPR011598 GO:0046983
Arst6g00515 278 SMART finulus 102 153 IPR011598 GO:0046983
Arst6g00515 278 PANTHER MAX DIMERIZATION, MAD 65 274 - -
Arst6g00515 278 MobiDBLite consensus disorder prediction 58 93 - -
Arst6g00515 278 Gene3D - 78 160 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00515 Arst-Chr6 4628524 4629947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00515 87 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 61.453 2.51e-68 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst6g00515 HLH 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00515 - - aip:107645875 464.536