Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00503 ATGGCCAGCAGATTTTGGTTTGGAAAGAAGAAAAGTAGTAGCAGCCATGGTGGCGGTTCAGAAAGGAAGCTCTCATTGGACGATGCTTCTCTCGCCGCAAAACCCAGAAGGCGAACCAGCTTCTTGTTTTCTTCTCCTTCTCCACTTCAAGGGTCGAGGCACATTGAGAGGGATAATAGACATTCCTTAACCCCAACAAGATCTGAATATTCCGTATCAAGAACACCACCACCCTTTCCCTTTCGACCCCATGATGATGATCATGATGAAGATTCATTGCCGCCACCAGCCACTTGTTTAAGCTTCAAATGGAAAAATATCTTTAAGCCATGGAAGAAGAATAATAATAATATAAGAGCATCATCACCATCAACTACTAGGCCCTCTCCTCCTTCTCCTTCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCGCCTCCTCCTCCGACGCCGCCAAGCCGAGGCCATGGCAACTTTAATTTTCCTCCTCTCATCGCTTTCAGATCCTTCCAAATTCGACATGCAACCAACAATTTTAGCAGAGAGAATTTGATTGGAAGAGGTGGGTATGCTGATGTTTTCAAGGGTCGTCTGAATGGGGAAATGGTAGCTATAAAAAAATTGAACAAAGGGATTCATGCTGCAAATAAGAACATGCCTTCCTCGTCCTCGTCGTCGCCGTCATCATCGTCAAGCTTTCTGAAAGAGCTAAACATCATTGCCTACATCGACCATCCTAATACTGCAAAGCTTATTGGATACAGTTCAGAAAAGGAATTCTGCCTCGTCTTCCAACTTTCTCCACTTGGAAGCTTAGCTTCTATTCTCCATGGTCCAAATAGACACATATTAACTTGGAATAGAAGGTATAATATTGCTCTGGGAATAGCAAGAGGGCTGTTGTATTTGCATGATCATTGTCACAGGCGAATCATTCATAGAGATATTAAATCTGATAATATTCTGCTCACTAAAAATTTTGAGCCACAGATTTGTGATTTTGGACTTGCAAAGTGGTTGCCACCAGATGCTGATCAGCAACATGTCACAAGATTTGAAGGCACATTAGGGTATTCTGCTCCGGAATATTTGACACATGGCATAGTAGATGAGAAAACAGATGTTTATGCATTTGGGATCCTCTTGCTGGAGATTTTAACCGGGCGTAAGGCCTTGGATTATTTGCAACAAAGCATTTTGATATGGGCAAAGCCATTAATTAATGCTCATAATGTTAAGGAGCTTGTTGATCCATCACTTGGTGAAGATTATGACATAGAGCAGGTGGAACGTCTTCTTTTGACTGCTTCTCTCTGTGTTGAGCATTCTCCATTCTTGCGTCCTCGCATGGTTCAGACTATGGAATTGCTGAAACCTGAAGAAGATATAATCTTCGAATTTGAAAACGATGGAACTCCAAGGCGCGTTACTTGA 1431 0.4291 MASRFWFGKKKSSSSHGGGSERKLSLDDASLAAKPRRRTSFLFSSPSPLQGSRHIERDNRHSLTPTRSEYSVSRTPPPFPFRPHDDDHDEDSLPPPATCLSFKWKNIFKPWKKNNNNIRASSPSTTRPSPPSPSPPPPPPPPPPPPPPTPPSRGHGNFNFPPLIAFRSFQIRHATNNFSRENLIGRGGYADVFKGRLNGEMVAIKKLNKGIHAANKNMPSSSSSSPSSSSSFLKELNIIAYIDHPNTAKLIGYSSEKEFCLVFQLSPLGSLASILHGPNRHILTWNRRYNIALGIARGLLYLHDHCHRRIIHRDIKSDNILLTKNFEPQICDFGLAKWLPPDADQQHVTRFEGTLGYSAPEYLTHGIVDEKTDVYAFGILLLEILTGRKALDYLQQSILIWAKPLINAHNVKELVDPSLGEDYDIEQVERLLLTASLCVEHSPFLRPRMVQTMELLKPEEDIIFEFENDGTPRRVT 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00503 476 SUPERFAMILY Formin homology 2 domain (FH2 domain) 137 146 - -
Arst6g00503 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Arst6g00503 476 MobiDBLite consensus disorder prediction 126 155 - -
Arst6g00503 476 SUPERFAMILY Protein kinase-like (PK-like) 157 456 IPR011009 -
Arst6g00503 476 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 267 469 - -
Arst6g00503 476 Gene3D Transferase(Phosphotransferase) domain 1 267 468 - -
Arst6g00503 476 PANTHER OS08G0249100 PROTEIN 155 462 IPR046958 -
Arst6g00503 476 ProSitePatterns Protein kinases ATP-binding region signature. 184 206 IPR017441 GO:0005524
Arst6g00503 476 MobiDBLite consensus disorder prediction 15 34 - -
Arst6g00503 476 MobiDBLite consensus disorder prediction 1 94 - -
Arst6g00503 476 ProSiteProfiles Protein kinase domain profile. 178 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00503 476 Gene3D Phosphorylase Kinase; domain 1 159 265 - -
Arst6g00503 476 MobiDBLite consensus disorder prediction 113 159 - -
Arst6g00503 476 SMART serkin_6 178 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00503 476 Pfam Protein kinase domain 179 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00503 Arst-Chr6 4509092 4514585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00503 166 462 Trihelix Transcription Factor Family AT1G70460 41.558 2.44e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Arst6g00503 Pkinase 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00503 - - aip:107646486 797.349