Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00481 ATGGGGTGTGTGATTAGCAGGGAGGTTTCTTCTGGAATAATCGCAGAGGTGAAAGAGGAGAAGAGTTTCGGTGCTGATTCTAAGAGTAATAATAAGGTTGATGGAGACGCGGTAGAGGTTCAGAATCAGAATCGGAATCACAATGGTGGTAACCACCACAAGGAAGAGAAGAGTGGCAGCGAAGTTCAGAAGCCGAGGGGAGAAAGGAGAAGATCGAAGAAACCGAATCCGCGGCTAAGCAATCCTCCCAAGCATTTAAGGGGTGAGCAGGTTGCGGCTGGCTGGCCACCCTGGCTCACCGCCGTGTGCGGCGAAGCGCTTAACGGCTGGATTCCCCGAAAGGCTGACACATTTGAGAAGATTGATAAGATCGGGCAAGGAACATATAGTAATGTGTACAAAGCTAAAGACATGATGACAGGCAAAATTGTTGCTCTAAAGAAGGTTCGATTTGATAATTTGGAACCTGAGAGTGTAAAATTCATGGCTAGAGAGATTCTTATTTTGCGGAGATTGGATCATCCAAATGTTGTAAAGTTGCAAGGCTTAGTTACATCAAGGATGTCCTGCAGTCTGTATTTGGTGTTTGATTACATGGTGCATGATTTAGCTGGACTTGTTGCGAGCCCACGAATCAGGTTCACGGAACCTCAGGTCAAATGTTACATGCATCAACTGCTATAAAAATCAAATCTTCTCATTGACAATGAAGGAATACTTAAGATTGCTGACTTTGGACTGGCATCTTTGTTCGATCCAAACCATAAGCATCCCATGACTAGTCGAGTGGTAACTCTTTGGTACCGGCCCCCAGAATTGCTTCTTGGTGCCACCGATTATGGTGTGGGTATAGACCTATGGAGCGCCGGATGCATTTTAGGAGAGTTATTGGCTGGAAAGCCAATTATGCCGGGTCGTACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCTTCTGATGAATATTGGAAGAAGTCGAAGTTGCCCAACGCCACCTTGTTTAAGCCTCGAGAGCCATACAAGAGATGCCTAAGAGAGACATTTAAAGATTTTCCACCTTCTGCACTACCCCTTATAGAAAGTCTTCTGGCATTTGATCCTGCCGAACGGAAAACTGCCTCAGATGCTTTGCGAAGTGAGTTCTTCACCACAGAGCCATATGCTTGTGATCCTTCAAGTCTTCCAAAATATCCTCCAAGCAAGGAAATGGATGCTAGACGGCAGGACGAAGAGGCCAGAAGAATAAGGGCTGCAAGCAAAGCTCAGGCTAATGGTCCAAGGAAGCATCGCATGCGTGATCGTGCCGTGAAAGCTATTCCTGCTCCTGAAGCCAATGCTGAGATTCAATCCAACATTGATAGAAGGCGTCTAATAACTCATGCAAATGCTAAGAGCAAGAGTGAAAAGTTCCCACCGCCACATCAAGATGGACAACTTGGATTTCCATTGGGATCTTCCCATCGTATTGATCCAGATACTGTTCCTATTGATGTCTCCTTCACTTCAACAACGTCGTATATTTATTCAAAGGAACCATTCCAAGCGTGGTCAGGTCCCATAGGTAATGCTGCTGCTGAAATTGGAGTGCCAAAAAACAAGAGACACACCGCAACTGATGCATTGGATTTATCAAAACCACATAAAGGTTCACACAAGGATAAAGTTAAAGGAAAGAAAACCATAGCTTAG 1701 0.4503 MGCVISREVSSGIIAEVKEEKSFGADSKSNNKVDGDAVEVQNQNRNHNGGNHHKEEKSGSEVQKPRGERRRSKKPNPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDMMTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLQGLVTSRMSCSLYLVFDYMVHDLAGLVASPRIRFTEPQVKCYMHQLLXKSNLLIDNEGILKIADFGLASLFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCLRETFKDFPPSALPLIESLLAFDPAERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDARRQDEEARRIRAASKAQANGPRKHRMRDRAVKAIPAPEANAEIQSNIDRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSHRIDPDTVPIDVSFTSTTSYIYSKEPFQAWSGPIGNAAAEIGVPKNKRHTATDALDLSKPHKGSHKDKVKGKKTIA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00481 566 CDD STKc_CDK9_like 118 386 - -
Arst6g00481 566 MobiDBLite consensus disorder prediction 463 494 - -
Arst6g00481 566 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Arst6g00481 566 MobiDBLite consensus disorder prediction 534 566 - -
Arst6g00481 566 MobiDBLite consensus disorder prediction 404 421 - -
Arst6g00481 566 FunFam probable serine/threonine-protein kinase At1g54610 201 426 - -
Arst6g00481 566 MobiDBLite consensus disorder prediction 48 68 - -
Arst6g00481 566 Gene3D Phosphorylase Kinase; domain 1 105 200 - -
Arst6g00481 566 SUPERFAMILY Protein kinase-like (PK-like) 112 393 IPR011009 -
Arst6g00481 566 MobiDBLite consensus disorder prediction 13 27 - -
Arst6g00481 566 FunFam probable serine/threonine-protein kinase At1g54610 105 200 - -
Arst6g00481 566 MobiDBLite consensus disorder prediction 394 432 - -
Arst6g00481 566 PANTHER CELL DIVISION PROTEIN KINASE 116 390 - -
Arst6g00481 566 Gene3D Transferase(Phosphotransferase) domain 1 201 426 - -
Arst6g00481 566 MobiDBLite consensus disorder prediction 536 553 - -
Arst6g00481 566 Pfam Protein kinase domain 118 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00481 566 MobiDBLite consensus disorder prediction 1 90 - -
Arst6g00481 566 ProSiteProfiles Protein kinase domain profile. 118 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00481 Arst-Chr6 4322290 4326252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00481 110 426 Core Cell Cycle Gene Families AT5G10270 49.284 4.26e-107 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Arst6g00481 Pkinase 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00481 K08819 - gmx:100786837 952.97