Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00474 ATGGTTTCATCATCATCTCCCTCTGTAGTGTTTACAGTGAAATGGTGCGAACCAGAGCTAGTGGCTCCGGCCTCGCCCACTCCCCATGAAGTTAAACAACTATCAGACATAGATGATCAAGAAGGGCTACGTTACCAACTTCCAATCATAAATATATATCGTCACAATCCATCAATAGAAGGAAAAGACCCAGTAAAGGTGATAAGAGATGCACTCTCAAGAACACTTGTGTTTTACTACCCGTTTGCCGGTAGGCTTAGGGAGGGTCATGGCGGCAAGTTGATGGTTGATTGCACTGCAGAGGGTGTATTGTTCATTGAGGCCGATGCTGACGTGCCACTTCATCAACTTGGTGAAGCTCTTCAACCTCCATTCCCTTGCTATAAGGAATTGCTTTACAATGTTCCTGGCTCAGATGGAATTATCGGCTGTCCCCTTTTACTCTTACAGGTCACACGCTTTAAGTGCGGCGGTTTTTCTGTCGGCATACGGGTGAACCACACGATGGTAGATGCAACTGGTATTGTGCAATTCATGAACGCCATGGCTGAAATCTCTCGAGGCTCTCATCAACCTTCCATTCTACCCGTTTGGTGTAGGGAGCTTCTAACTGCAAGAGACCCGCCACGCATCACATGCAACCATCGAGAATTTGAGGAAGCAAAAGATATTAAGGAATGGGAAACCATTATTGATGACAAAAACATGATTAAACGAAATTTCTTCTTTGGACCCACTGAAATAGCTTCTCTTCGCTGCTTGACTCTAAATCAATCCGCTGAATACACTGGATTTGAGCTTATCACTGCATGCCTCTGGTATTGTCTTGTAAAAGCATTGCAACTACCACCAGAAAAAGAAGTTCGAATGTATTGTGTCGTCAATGCTCGTGCTAGATTTAACCCTCCCATGCCAATCGGTTATTATGGAAACGTTATATCGTTTCCGGCGGCGGTCTCCACCGTAGAGAAGCTATGTGAAAATCCATTTGAATATATTGTAAAGTTAATAAAAAAAGCGAAAGCCGAGCCAACAGAAGAATACATGCATTCTTTAGCAGATTTAATGGTGATTAAGGGACGACCTTTGACTACAAGAGCATGGTCTTTTCTTGTGTCAAAGGTGACACGTATTGGGTTTAGAAAAGTGGATTTTGGGTGGGGCAATGCAGTGTATGGTGGGATAAGTGGCGACAAGATTTTTGGAGAACTTACTCTCATGGATTGTGAGAATGCAAATGGAGAAGAAAGTGTTGTAGTTCCACTTTACTTGCCTGCCAATGCTATGAAGAGGTTTGCAAAAGAAATGGATGATTTGCTTCGGATCCCAAATCAACCTACAATGAGTGGCCAAAACAAAGCCTGTAATTAA 1371 0.4318 MVSSSSPSVVFTVKWCEPELVAPASPTPHEVKQLSDIDDQEGLRYQLPIINIYRHNPSIEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGGKLMVDCTAEGVLFIEADADVPLHQLGEALQPPFPCYKELLYNVPGSDGIIGCPLLLLQVTRFKCGGFSVGIRVNHTMVDATGIVQFMNAMAEISRGSHQPSILPVWCRELLTARDPPRITCNHREFEEAKDIKEWETIIDDKNMIKRNFFFGPTEIASLRCLTLNQSAEYTGFELITACLWYCLVKALQLPPEKEVRMYCVVNARARFNPPMPIGYYGNVISFPAAVSTVEKLCENPFEYIVKLIKKAKAEPTEEYMHSLADLMVIKGRPLTTRAWSFLVSKVTRIGFRKVDFGWGNAVYGGISGDKIFGELTLMDCENANGEESVVVPLYLPANAMKRFAKEMDDLLRIPNQPTMSGQNKACN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00474 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 434 - -
Arst6g00474 456 Gene3D - 12 217 IPR023213 -
Arst6g00474 456 Gene3D - 218 436 IPR023213 -
Arst6g00474 456 Pfam Transferase family 13 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00474 Arst-Chr6 4237129 4239058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00474 20 434 Monolignol Biosynthesis Gene Families AT5G48930 28.806 4.23e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00474 K19861 - gmx:100792864 559.681