Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00445 ATGGGTAGAAAAGGTTATTGTGAAGGTGGAGATATGGCAGAAGCTATAAAGAAAGCTAACGGTGTCATGTTTTCTGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTACTTGCACATGAACCATATTCTTCATCGTGATGTCAAGTGTTCCAATATATTCTTGACAAAAGATCATGATATACGTCTTGGCGATTTTGGACTTGCCAAAATGTTGACTTCGGATGACCTTACTTCCTCTGTTGTGGGAACACCTAGCTACATGTGCCCTGAGCTCCTTGCTGACATACCCTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGCTGTATATATGAAATGGCCTCGCTTAAGCCTGCGTTCAAAGCATTTGATATACAAGCACTAATTAACAAGATTAATAAGTCCATAGTGGCTCCACTGCCAACAAAATATTCTGGTGCATTTCGAGGTCTTGTTAAAAGCATGCTGCGGAAAAACCCAGAGCTTAGGCCTAGTGCTGCAGAGCTACTTGGGCATCCACATCTTCAACCTTATGTTCTTAAGATCCATCTCAAAATCAATAGCCCCAGTCGAAATACATTGCCAGGTCGTTGGCCAGATTCCGACTACATTAAGAAAACTAGACTTTTTAGCCTGGAAGATGATCCTGTTTCCATATACAGGGATAAGTGGAATACTTTTAGCAATGATCGGAACTTAAACCCTAGTATATCTGGAGCAGAGCAAGATTCTCATTGCTCTACTCTGGAAATAGATTGTACTCCTGATCATTTGAATGAAAGGTTAGCAGAACTGGAAGTTGAGGATAGCCGTGAAGTGAAGTCAATTCACAAGCCAGTTGTTTCTAGAACTTCTACCATTGGCAAGACTTCAACACACACTTCACCAAAAGCTTCTTCTAACAAGAAGAAATCAACAGAACCCTCTAAGAATTATAAGGTGCTTCCTGCTTCTCACCATAACACCAAACAACGTATCCATGGTCAGAGTCGCAGAGTATCCCTGCCGACGGCAAGAAGTGGTGCCATTCGGCAGCTGTCTCACAGGCCTAGCATTGGCTTACTCGACCATTTAAATTCACCCAATGTTTCGGTTAACGCCCCCCGTATTGATAAAATAGCAGAATTTTCATTAGCATCATATGAAGATCAATTGTTTCCCATTACTAGACCTTCATCAACTTCTGCGCAGGGCTCCTGGGGCACTCCGCCCTGTGTCAATGATTCAACAATGGTAGACAAATGTACAATCGAGCTAGGTGATAGAGCCTACACCAGGCCAAAATCTACAGATTCTTGGCAGGGAATTAAGCGCAGCATTTTAAAGAATGATGAGGTTAAAAGTGGCTCATCCGATCAAAATGCAACTGCTGGCGCATCAAGTAACAACTCTTCAGACCTGCGGCGTCGACAGTTTGACCCTTCTTCATTCCAACAAAGGGCTGAAGCGTTAGAAGGCTTGCTTGAGTTTAGCGCAAGACTACTACAGCAAGAAAGGTACGACGAACTTGGAGTTTTATTAAAACCGTTTGGACCCGAGAAGGTTTCCCCAAGGGAAACTGCTATTTGGTTGAGCAAGAGCTTCAAAGACAATAGTGCCAACCGGGAACAATCGGTGTAA 1638 0.4292 MGRKGYCEGGDMAEAIKKANGVMFSEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDHDIRLGDFGLAKMLTSDDLTSSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMASLKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLGHPHLQPYVLKIHLKINSPSRNTLPGRWPDSDYIKKTRLFSLEDDPVSIYRDKWNTFSNDRNLNPSISGAEQDSHCSTLEIDCTPDHLNERLAELEVEDSREVKSIHKPVVSRTSTIGKTSTHTSPKASSNKKKSTEPSKNYKVLPASHHNTKQRIHGQSRRVSLPTARSGAIRQLSHRPSIGLLDHLNSPNVSVNAPRIDKIAEFSLASYEDQLFPITRPSSTSAQGSWGTPPCVNDSTMVDKCTIELGDRAYTRPKSTDSWQGIKRSILKNDEVKSGSSDQNATAGASSNNSSDLRRRQFDPSSFQQRAEALEGLLEFSARLLQQERYDELGVLLKPFGPEKVSPRETAIWLSKSFKDNSANREQSV 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00445 545 SMART serkin_6 3 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00445 545 FunFam Serine/threonine-protein kinase Nek2 7 197 - -
Arst6g00445 545 SUPERFAMILY Protein kinase-like (PK-like) 6 230 IPR011009 -
Arst6g00445 545 MobiDBLite consensus disorder prediction 450 481 - -
Arst6g00445 545 MobiDBLite consensus disorder prediction 285 308 - -
Arst6g00445 545 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00445 545 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Arst6g00445 545 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 495 - -
Arst6g00445 545 Pfam Protein kinase domain 6 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00445 545 MobiDBLite consensus disorder prediction 326 345 - -
Arst6g00445 545 Gene3D Transferase(Phosphotransferase) domain 1 2 196 - -
Arst6g00445 545 MobiDBLite consensus disorder prediction 452 481 - -
Arst6g00445 545 MobiDBLite consensus disorder prediction 282 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00445 Arst-Chr6 4023235 4027731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00445 6 212 MAP Kinase Kinase Kinase AT1G53570 33.036 9.45e-31 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Arst6g00445 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00445 K08857 - gmx:100796019 831.632