Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00443 ATGGAGCAGTATGAAGTACTTGAGCAAATTGGAAAAGGTGCTTTTGGTTCTGCACTTCTTGTCAAGCATAAGCATGAGAAGAAAAAATATGTTCTGAAGAAGATTCGCCTTGCCCGTCAAACTGAGCGTTCCCGCAGGTCTGCACACCAGGAGATGGAGCTCATTTCCAAATTAAGAAATCCATTTATAGTAGAGTACAAAGATTCATGGGTAGAAAAGGGTTGCTATGTATGCATCATTATAGGTTATTGTGAAGGTGGAGATATGGCAGAAGCTATAAAGAAAGCTAACGGTGTCATGTTTTCTGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTACTTGCACATGAACCATATTCTTCATCGTGATGTCAAGTGTTCCAATATATTCTTGACAAAAGATCATGATATACGTCTTGGCGATTTTGGACTTGCCAAAATGTTGACTTCGGATGACCTTACTTCCTCTGTTGTGGGAACACCTAGCTACATGTGCCCTGAGCTCCTTGCTGACATACCCTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGCTGTATATATGAAATGGCCTCGCTTAAGCCTGCGTTCAAAGCATTTGATATACAAGCACTAATTAACAAGATTAATAAGTCCATAGTGGCTCCACTGCCAACAAAATATTCTGGTGCATTTCGAGGTCTTGTTAAAAGCATGCTGCGGAAAAACCCAGAGCTTAGGCCTAGTGCTGCAGAGCTACTTGGGCATCCACATCTTCAACCTTATGTTCTTAAGATCCATCTCAAAATCAATAGCCCCAGTCGAAATACATTGCCAGGTCGTTGGCCAGATTCCGACTACATTAAGAAAACTAGACTTTTTAGCCTGGAAGATGATCCTGTTTCCATATACAGGGATAAGTGGAATACTTTTAGCAATGATCGGAACTTAAACCCTAGTATATCTGGAGCAGAGCAAGATTCTCATTGCTCTACTCTGGAAATAGATTGTACTCCTGATCATTTGAATGAAAGGTTAGCAGAACTGGAAGTTGAGGATAGCCGTGAAGTGAAGTCAATTCACAAGCCAGTTGTTTCTAGAACTTCTACCATTGGCAAGACTTCAACACACACTTCACCAAAAGCTTCTTCTAACAAGAAGAAATCAACAGAACCCTCTAAGAATTATAAGGTGCTTCCTGCTTCTCACCATAACACCAAACAACGTATCCATGGTCAGAGTCGCAGAGTATCCCTGCCGACGGCAAGAAGTGGTGCCATTCGGCAGCTGTCTCACAGGCCTAGCATTGGCTTACTCGACCATTTAAATTCACCCAATGTTTCGGTTAACGCCCCCCGTATTGATAAAATAGCAGAATTTTCATTAGCATCATATGAAGATCAATTGTTTCCCATTACTAGACCTTCATCAACTTCTGCGCAGGGCTCCTGGGGCACTCCGCCCTGTGTCAATGATTCAACAATGGTAGACAAATGTACAATCGAGCTAGGTGATAGAGCCTACACCAGGCCAAAATCTACAGATTCTTGGCAGGGAATTAAGCGCAGCATTTTAAAGAATGATGAGGTTAAAAGTGGCTCATCCGATCAAAATGCAACTGCTGGCGCATCAAGTAACAACTCTTCAGACCTGCGGCGTCGACAGTTTGACCCTTCTTCATTCCAACAAAGGGCTGAAGCGTTAGAAGGCTTGCTTGAGTTTAGCGCAAGACTACTACAGCAAGAAAGGTACGACGAACTTGGAGTTTTATTAAAACCGTTTGGACCCGAGAAGGTTTCCCCAAGGGAAACTGCTATTTGGTTGAGCAAGAGCTTCAAAGACAATAGTGCCAACCGGGAACAATCGGTGTAA 1869 0.4264 MEQYEVLEQIGKGAFGSALLVKHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVMFSEEKLCKWLVQLLMALDYLHMNHILHRDVKCSNIFLTKDHDIRLGDFGLAKMLTSDDLTSSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMASLKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLGHPHLQPYVLKIHLKINSPSRNTLPGRWPDSDYIKKTRLFSLEDDPVSIYRDKWNTFSNDRNLNPSISGAEQDSHCSTLEIDCTPDHLNERLAELEVEDSREVKSIHKPVVSRTSTIGKTSTHTSPKASSNKKKSTEPSKNYKVLPASHHNTKQRIHGQSRRVSLPTARSGAIRQLSHRPSIGLLDHLNSPNVSVNAPRIDKIAEFSLASYEDQLFPITRPSSTSAQGSWGTPPCVNDSTMVDKCTIELGDRAYTRPKSTDSWQGIKRSILKNDEVKSGSSDQNATAGASSNNSSDLRRRQFDPSSFQQRAEALEGLLEFSARLLQQERYDELGVLLKPFGPEKVSPRETAIWLSKSFKDNSANREQSV 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00443 622 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00443 622 MobiDBLite consensus disorder prediction 527 558 - -
Arst6g00443 622 FunFam Serine/threonine-protein kinase Nek2 84 274 - -
Arst6g00443 622 SUPERFAMILY Protein kinase-like (PK-like) 1 307 IPR011009 -
Arst6g00443 622 MobiDBLite consensus disorder prediction 359 396 - -
Arst6g00443 622 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 572 - -
Arst6g00443 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Arst6g00443 622 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Arst6g00443 622 MobiDBLite consensus disorder prediction 362 385 - -
Arst6g00443 622 MobiDBLite consensus disorder prediction 403 422 - -
Arst6g00443 622 Gene3D Transferase(Phosphotransferase) domain 1 84 271 - -
Arst6g00443 622 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Arst6g00443 622 MobiDBLite consensus disorder prediction 529 558 - -
Arst6g00443 622 CDD STKc_Nek 3 258 - -
Arst6g00443 622 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00443 622 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00443 622 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00443 Arst-Chr6 4023235 4028527 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00443 10 289 MAP Kinase Kinase Kinase AT1G53570 30.333 4.70e-38 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Arst6g00443 Pkinase 1.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00443 K08857 - gmx:100796019 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00443 6 4023235 4028527 Arst6g00443 6 4023235 4028527 ECH
Arst6g00444 6 4023235 4028524 Arst6g00443 6 4023235 4028527 PCT