Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00441 ATGGGGAAGGCAGGTAAATGGATTAGAAACTTTCTTATGGGGAAAAAGGAGGATAAGTACAAGAAGATTGACGCAGTCTGTGCCGAGAGTAAGAGCGCTGCAACGGATAGTCCCAAAGTGAAACGCAGATGGAGCTTCGGAAGACTAACAATTGGAAGAACATCAGGCAAGATGGCAGGGCATAAATTTTCCATATCTTTTGACTCTGGCGACTCCGCCAAACTGCAAGCTCAGACTCCAAGGAGGAGTCTTCCAATAGTAGAGTTCAAGGCTCCTAGCGACACCAGATCTAAAAATTCAGCAGCTACAATGATTCAAGCTGCCTTTCGCTCGTATCTGGCTAGGAAAGCATTGCATGCTTTAAAGGGATTAGTCAAGATACAAGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCTATGCTGCACAGCATGCATGCGTTGATGACCATACAAGTTAGAGCTCGGATTCAAAGAATTCAGACGGTAGAGGAAGCAAATGTTCATGGAAAACAGCCTGTGCAACATACACAAATTCCACAGAGCAAAGGTCACATAAAAGAATATAAAGAACCGAAGGATATGACCATGGAAGAAATGCTGGAGGCTTTGAAAAGAAGAAGTCAGTCACTAGATCGCTTGCATTTTGAGGGAATAAAGCATGAATCCATGGCATTCTATTCGAAGCACAAGTCAGTTTCAGAAAGACAATTTGAGTACAATGATAACAGTTTAATCACAGCACCCAACAGCCCAGAAAACTACTGTGGCTTGTCGGAATATAACACAACAGCAATGGCCATGTCAACTCCTCGGCGACACCCCGTGTCTCACCGGCAATCACAATCCCCAAATTTCATGAACAATACAGTGTCTTCCAAGGCAAAAGCAAGGTCTCAGAGTGAGCCAAAACAACGTCCCAAATGGGGAAAGAGGCAGAAAAGCAGGTCCCCAGAATGTACCAAAGAACCTAGCACCTCACAAAATGGTCTAAGGCAAAATCTGCACTTAAATTCGTCACGCTTTGACCTTGGAAGTTTAGACTATTGGGTTGTCAACCTTTATGGGTCAAGAACAAAGGACAGCTCCCGCAATTCTTTTGGCAGCAGCACGGTGACTAGTGATTCCTACTATTGA 1143 0.4427 MGKAGKWIRNFLMGKKEDKYKKIDAVCAESKSAATDSPKVKRRWSFGRLTIGRTSGKMAGHKFSISFDSGDSAKLQAQTPRRSLPIVEFKAPSDTRSKNSAATMIQAAFRSYLARKALHALKGLVKIQALVRGHLVRKQTTAMLHSMHALMTIQVRARIQRIQTVEEANVHGKQPVQHTQIPQSKGHIKEYKEPKDMTMEEMLEALKRRSQSLDRLHFEGIKHESMAFYSKHKSVSERQFEYNDNSLITAPNSPENYCGLSEYNTTAMAMSTPRRHPVSHRQSQSPNFMNNTVSSKAKARSQSEPKQRPKWGKRQKSRSPECTKEPSTSQNGLRQNLHLNSSRFDLGSLDYWVVNLYGSRTKDSSRNSFGSSTVTSDSYY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00441 380 MobiDBLite consensus disorder prediction 271 300 - -
Arst6g00441 380 Pfam IQ calmodulin-binding motif 100 118 IPR000048 GO:0005515
Arst6g00441 380 Pfam IQ calmodulin-binding motif 125 139 IPR000048 GO:0005515
Arst6g00441 380 Gene3D - 97 152 - -
Arst6g00441 380 MobiDBLite consensus disorder prediction 301 321 - -
Arst6g00441 380 MobiDBLite consensus disorder prediction 271 336 - -
Arst6g00441 380 SMART iq_5 97 119 IPR000048 GO:0005515
Arst6g00441 380 SMART iq_5 120 141 IPR000048 GO:0005515
Arst6g00441 380 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Arst6g00441 380 MobiDBLite consensus disorder prediction 322 336 - -
Arst6g00441 380 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Arst6g00441 380 PANTHER IQ-DOMAIN 5-RELATED 1 322 - -
Arst6g00441 380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 144 IPR027417 -
Arst6g00441 380 Pfam Protein of unknown function (DUF4005) 267 329 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00441 Arst-Chr6 3995231 3997083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00441 1 348 IQD Protein Family AT4G14750 36.842 2.71e-38 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00441 - - lang:109345769 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00441 6 3995231 3997083 Arst6g00441 6 3995231 3997083 ECH