Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00386 ATGGCTCCCAATCCAAGAGTTGTTCAGGCCTTTAATGCTATGAAGGCATTAGGAATTTCAGCTGAAGAGGTGAAGCCGGTGTTGGCAGAGTTGTTAAGAGTCTACGATAAAAATTGGGAACTTATTGAAGAGGACAATTATCGGACACTTGTAGATGCATACTTTGACTTCAAAGAAGATAAGGGAACAGATGCTAAGAAAAAAGTGTCTGTCAATTTTCATGCTCGAGAAAGACCAAAACAGAAGCTGCACTTGATAGATGATGATGATGATGATAACCAGGTTTTGTCAACAACAAATAAGTCGAGCCAAAAGTTATCCATTGCAGATAGGAAAACACCTCCAGGTAATTCTTCACAAGAAATCATTGAGCCATCTCAAGCTTCTAAGCAAGATAGCAAGCCCAGAACTAGTTCAGAAGCATCACATGCAAGGTTGATGAAGGTAGAAAGGGTTTCCAGTTCACCTTGCAACGCACCTAAATATAGAAAAACGTATTACGACATAGCACCATCTTCAGGGCACTCTGTTGATTATGAGAAAGAGCTAGTGAAACCCAGAACTAAGAAACCAAAGTTACAGACTCAGCCTATTTCAACAAATCATGACGGATTATTTGATGCTTCCTCATCATGCAATAATAATGCCACAACTAGCACGGGAAATATCACTATTGCTTCTTCACCCCGTGGAGAAGTTAAATTGTCTTTAAACTGCAACTCTGCCTTGGCTCAACCGGACTTCTGTAATCCTAATTTGGATACTGTGATGAAGTTCATGGAGGAGAAGTACCTTAGCTCTTGCATGACTCAGGATCCTCAGTTTTCAATGGTGAAGCTACTAAATGGTTTATGCAGGAGCTATCTGATGTTGGGACATAAAAAACGTTCGAATTTCAGGTCTTCTTCCAGCAACTTGGCAGTTACTCAAGATGAAAGGAGTTCCTCTCAGTTTATCAATGACATAACAAGAGGTTCAGAAGAGGTGAAAATCCCATTAATAGATGAAAATGGCAGTGAGGACTTGCCAAAATTTAATTATATACCGCAAAATATAATATACCAAAGTGCTAATGTAAATATTTCATTGGCTCGAATTTCGGATGAGGGTTGCTGTTCTGATTGTTCAGGCAACTGTCTTTCTGCTTCACTGCCTTGTGCATGTGCCCGTGAAACTGGTGGAGAGTTTGCTTACACTCCTGAAGGTGTGTTGAACGAAGAGTTTCTTAAAGCTTGCATTTCCATGAAGAATGAACCTCAAGATCGTCATTTCGTGTATTGTCAAGAGTGCCCATTGGAGAAGTCTAAGAATGAGTTCATGCCCGAACAATGCAAAGGGCATATGGTTAGGAAGTTTATCAAAGAATGCTGGAGGAAATGTGGCTGTGACATGCGATGTGGAAATCGAGTAGTACAAAGAGGTATAAGATGCAAATTGCAGGTGTACATGACTCGTGAGGGAAAGGGCTGGGGCCTTAGAACACTTGAGGATTTGCCGAAGGGTACTTTTGTATGTGAATACGTTGGGGAAATATTAACCAATACAGAGTTATACGAAAGGAATGTGCACAGCAGTTGCAGCAATGACAGACACACATATCCCGTAACTCTTGATGCAGACTGGGGATCAGAAGGGGTCTTGAAAGATGAGGAAGCGCTTTGTTTAGATGCAACATATAATGGAAATGTTGGAAGGTTTATCAATCACAGATGCTTTGATGCAAATCTCATTGACATTCCTGTTGAAGTGGAGACTCCTGATCACCACTATTACCATCTTGCTTTCTTTACCACCCGAGATGTGAGAGCCAATGAGGAGTTGACGTGGGATTATGGTATTGACTTTGATGATCATGACCATCCTATTAAAGCATTTCAATGTTCTTGTGGAAGCGCTTTCTGCGGTGATAAGAAGAGAAAAGGTAACTGGATAGCAGATAAAATGGACAAAAATACATGTAAAAAAGTTTAA 1971 0.4049 MAPNPRVVQAFNAMKALGISAEEVKPVLAELLRVYDKNWELIEEDNYRTLVDAYFDFKEDKGTDAKKKVSVNFHARERPKQKLHLIDDDDDDNQVLSTTNKSSQKLSIADRKTPPGNSSQEIIEPSQASKQDSKPRTSSEASHARLMKVERVSSSPCNAPKYRKTYYDIAPSSGHSVDYEKELVKPRTKKPKLQTQPISTNHDGLFDASSSCNNNATTSTGNITIASSPRGEVKLSLNCNSALAQPDFCNPNLDTVMKFMEEKYLSSCMTQDPQFSMVKLLNGLCRSYLMLGHKKRSNFRSSSSNLAVTQDERSSSQFINDITRGSEEVKIPLIDENGSEDLPKFNYIPQNIIYQSANVNISLARISDEGCCSDCSGNCLSASLPCACARETGGEFAYTPEGVLNEEFLKACISMKNEPQDRHFVYCQECPLEKSKNEFMPEQCKGHMVRKFIKECWRKCGCDMRCGNRVVQRGIRCKLQVYMTREGKGWGLRTLEDLPKGTFVCEYVGEILTNTELYERNVHSSCSNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVGRFINHRCFDANLIDIPVEVETPDHHYYHLAFFTTRDVRANEELTWDYGIDFDDHDHPIKAFQCSCGSAFCGDKKRKGNWIADKMDKNTCKKV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00386 656 SMART set_7 477 618 IPR001214 GO:0005515
Arst6g00386 656 SUPERFAMILY SET domain 329 634 IPR046341 -
Arst6g00386 656 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 642 - -
Arst6g00386 656 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 650 IPR025776 -
Arst6g00386 656 Gene3D - 1 60 IPR043017 -
Arst6g00386 656 MobiDBLite consensus disorder prediction 88 152 - -
Arst6g00386 656 SMART preset_2 319 461 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst6g00386 656 FunFam SET-domain containing protein lysine methyltransferase family protein 322 637 - -
Arst6g00386 656 ProSiteProfiles SET domain profile. 477 612 IPR001214 GO:0005515
Arst6g00386 656 CDD SET_SETDB-like 343 612 - -
Arst6g00386 656 MobiDBLite consensus disorder prediction 96 135 - -
Arst6g00386 656 Pfam SET domain 489 612 IPR001214 GO:0005515
Arst6g00386 656 Pfam Ubiquitin-binding WIYLD domain 6 59 IPR018848 -
Arst6g00386 656 MobiDBLite consensus disorder prediction 185 205 - -
Arst6g00386 656 Gene3D SET domain 322 637 IPR046341 -
Arst6g00386 656 ProSiteProfiles Pre-SET domain profile. 375 474 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst6g00386 656 Pfam Pre-SET motif 322 469 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00386 Arst-Chr6 3555677 3562840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00386 453 612 C2H2 Transcription Factor Family AT2G23740 43.478 2.07e-31 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst6g00386 Pre-SET 1.1e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00386 - - gsj:114402909 844.343