Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00384 ATGTCTTCATGTTCTCCTGTTCTTCCAACACCACTGGATAACAAGTACATGAAACCCCCAGATTCGTTTCAGCTTTCGCCTATAAGAGAAATGACTGTGAATCCATCCCCCTTACAATCTACATCGTCGAATTCCAACACCAGAAGTACCGGACACACATTTTCGTCCCCTGATGTTGTCTCTTTTTCTTCAGCTTCGCAGCATGAAAGGCAGCATCAACCTTCTTCCTTTGTTTCACAGACATTAGGTGAAGACAGTGTGTCTTCTGAGCTACATTCAGCAACATTCATTTCGCAGCCTCAAGAAAGCGACGAGATTTCCTGGGGACCGGATCCGTTCCAGGGTATGCTTGGTTTCCCTGAAAATGTTTCTGTCCAGCATGATCAGGTGGAAAATGGTGCTTGTTATACAAACGATGACAATGTCAAACAATCTGATTTTGGGGAGTGGGTTGATAAGTTAATGTCAATTGATGATTCTTATGACCCAAATTGGAGTCAGCTCCTTGGTGATGATAATGAATCAGAACCAAAACCAAAGCCCATCCAGCAGCAGAATGTACCATCTAAAGAAGTTAAAGGTCTTCCTAGTTCTCCATCAACTGCATCACAAACGAAGCCTCGAATGCGTTGGACACCGGAACTTCACGAGGCCTTTGTGGAAGCGGTGAATCAGCTTGGTGGCAGCGAGAAGGCTACTCCCAAGGGGGTCTTGAACCTCATGAAAGTTAAGGGCCTTACGATCTACCATGTCAAAAGCCACCTACAGAAGTATAGAACGGCCAGGTACAAACCTGAGACCCCAGAAGGAACTTCTGAGAAAAAGCTAAGTTCAATTGAAGAAATGAAATCTCTAGACTTGAAAACGAGTAAGGGGATTACCGAGGCATTGCGCTTGCAAATGGAACTCCAGAAGCGGCTTCACGAGCAACTCGAGATCCAAAGGAAGTTGCAGATTCAAATAGAAAACCAAGGGAAGCGCCTCCAGATGATGTTCGAGCAGCAGAGAGAGATGGGAGATAGCAAGTTTAAGGACTCCTCCTCTTCCTCCTTGGACGAGCCTTCCAATTCAGAAGCTCCAAAAGAGGAAAATGAGAAATTAGGAAGTGAAAGTTGCATAACGAAAGCCGGGCCAGGAGAAAGCTCTCGGGACGAAAGCACGAAGCAGGAAATGGCAGATGAAGCTCAAATTAGTGTCCCACCACCCACAAAACGGGTCAAGACTTAA 1227 0.4564 MSSCSPVLPTPLDNKYMKPPDSFQLSPIREMTVNPSPLQSTSSNSNTRSTGHTFSSPDVVSFSSASQHERQHQPSSFVSQTLGEDSVSSELHSATFISQPQESDEISWGPDPFQGMLGFPENVSVQHDQVENGACYTNDDNVKQSDFGEWVDKLMSIDDSYDPNWSQLLGDDNESEPKPKPIQQQNVPSKEVKGLPSSPSTASQTKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLNLMKVKGLTIYHVKSHLQKYRTARYKPETPEGTSEKKLSSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKRLQMMFEQQREMGDSKFKDSSSSSLDEPSNSEAPKEENEKLGSESCITKAGPGESSRDESTKQEMADEAQISVPPPTKRVKT 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00384 408 Coils Coil 294 314 - -
Arst6g00384 408 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 196 392 IPR044848 GO:0003700
Arst6g00384 408 MobiDBLite consensus disorder prediction 179 208 - -
Arst6g00384 408 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 263 IPR017930 -
Arst6g00384 408 NCBIfam myb-like DNA-binding domain, SHAQKYF class 206 260 IPR006447 GO:0003677
Arst6g00384 408 MobiDBLite consensus disorder prediction 1 115 - -
Arst6g00384 408 SUPERFAMILY Homeodomain-like 204 260 IPR009057 -
Arst6g00384 408 Pfam MYB-CC type transfactor, LHEQLE motif 293 337 IPR025756 -
Arst6g00384 408 Gene3D - 205 264 - -
Arst6g00384 408 FunFam Myb family transcription factor 205 263 - -
Arst6g00384 408 MobiDBLite consensus disorder prediction 27 105 - -
Arst6g00384 408 MobiDBLite consensus disorder prediction 162 209 - -
Arst6g00384 408 MobiDBLite consensus disorder prediction 336 408 - -
Arst6g00384 408 Pfam Myb-like DNA-binding domain 208 259 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00384 Arst-Chr6 3536620 3540412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00384 31 353 G2-like Transcription Factor Family AT3G04450 46.459 7.78e-84 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst6g00384 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00384 - - gmx:100803267 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00384 6 3536620 3540412 Arst6g00384 6 3536620 3540412 ECH
Arst6g00384 6 3536620 3540412 Arst6g00092 6 888258 893855 PCT