Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00361 ATGGATCATTATTATTATTATTCATCATTCTCTGTTCCACCACCATATGCAACTACATCAAACTTTAATCAATCCCTTCCCTTCAACGAAAATGACTCCGAGGAAATGCTTCTATGCGAGGTTCTTGCACAGGGAAGTGGCGGTGATGCAGCGGAAAACTCCTCCATCGAAGAGGTGAACTCAACCATGGCGGCGCTGCAGCCACAACAAGCATCTTACAGAGGGGTAAGAAGGAGGCCATGGGGAAAGTACGCGGCAGAGATAAGGGACTCTACGAGGAACGGCGAGAGGGTATGGTTGGGAACCTTTGATACGGCGGAGGAAGCTGCTTTGGCTTACGACCAAGCGGCATTGGCAAGTAGAGGATCAGTGGCGATTTTGAACTTCCCGGCAGGGATGGTTGTTGAGTCGCTAGAGAAGATGATGATGGAGTGTGGTGGGTTTAGTGAAGGTTGTTCTCCGGTGTTGGAGCTGAAGAAGAAGCATTCCATGAAGAGGAAGATGGAGAACAGGGAGAAGAAACTGCTCATGATGATGAATACAAATAATAACAACAATCATCATAATCATAATCATGTCATGGTATTCCAGGATTTGGGTGCTGACTATTTGGAACAACTTCTTACGCTCTCGTCCAAGGATGCAATGCTATAG 654 0.4664 MDHYYYYSSFSVPPPYATTSNFNQSLPFNENDSEEMLLCEVLAQGSGGDAAENSSIEEVNSTMAALQPQQASYRGVRRRPWGKYAAEIRDSTRNGERVWLGTFDTAEEAALAYDQAALASRGSVAILNFPAGMVVESLEKMMMECGGFSEGCSPVLELKKKHSMKRKMENREKKLLMMMNTNNNNNHHNHNHVMVFQDLGADYLEQLLTLSSKDAML 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00361 217 ProSiteProfiles AP2/ERF domain profile. 72 130 IPR001471 GO:0003700|GO:0006355
Arst6g00361 217 FunFam Ethylene-responsive transcription factor 2 71 131 - -
Arst6g00361 217 SMART rav1_2 72 136 IPR001471 GO:0003700|GO:0006355
Arst6g00361 217 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Arst6g00361 217 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Arst6g00361 217 Gene3D AP2/ERF domain 72 131 IPR036955 GO:0003700|GO:0006355
Arst6g00361 217 PANTHER DNA-BINDING DOMAIN 54 209 IPR044808 GO:0003700|GO:0009873
Arst6g00361 217 Pfam AP2 domain 73 122 IPR001471 GO:0003700|GO:0006355
Arst6g00361 217 SUPERFAMILY DNA-binding domain 73 131 IPR016177 GO:0003677
Arst6g00361 217 CDD AP2 73 131 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00361 Arst-Chr6 3322249 3322946 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00361 26 208 AP2-EREBP Transcription Factor Family AT3G23240 51.913 1.21e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Arst6g00361 AP2 3.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00361 K14516 - fve:101312740 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00361 6 3322249 3322946 Arst6g00361 6 3322249 3322946 ECH
Arst6g00361 6 3322249 3322946 Arst9g02615 9 97186898 97188016 ECH