Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00359 ATGGCGAATCGATGGTGGACCGATCCGGTGGGTCTGACCGGAGTAGACAACTCCACCAACTCTCCCATCAAGAAACCCGATCTGGGTTTATCTGCTCCCATCAACAAGCACGAAGAACAAGATGACAACAACAGCGACGACTACCCCAAGGAAGGAGCAATCGAGCTCTCCGCCACGCGCCGCCCAAGGGGCCGTCCTCCTGGTTCCAAGAACAAGCCCAAGCCGCCGATATTCGTCACCAGAGACAGCCCTAACGCACTCAGAAGCCACGTCATGGAGGTTGCTAACGGTGCTGACATCACCGATAGCTTGGTTCAGTTCGCAAGGAAGCGACAGAGAGGGGTCTGCGTTCTCAGCGCCACCGGGACAGTCGCCAACGTCACTCTCCGGCAGCCAACTGCTCCCGGCGCCGTCATGGCACTCCATGGGCGATTTGAGATCATATCTTTAACAGGCTCGTTTCTTCCCGGGCCGTCGCCGGCGGGGTCGACGGGGCTGACCGTGTACCTGGCTGGAGGGCAGGGGCAGGTGGTGGGCGGCGGGGTGGTGGGGCCTCTTGTGGCGTCGGGATCAGTTATGATAATGGCGGCAGGTGGTTCCGGCGGGGATGGTTATATGGTTGGGCAGCTCAGCCATGAAGGTTCTTGGGGTCATTCGAGACCACCACCACCCCCCTATTGA 681 0.5991 MANRWWTDPVGLTGVDNSTNSPIKKPDLGLSAPINKHEEQDDNNSDDYPKEGAIELSATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGADITDSLVQFARKRQRGVCVLSATGTVANVTLRQPTAPGAVMALHGRFEIISLTGSFLPGPSPAGSTGLTVYLAGGQGQVVGGGVVGPLVASGSVMIMAAGGSGGDGYMVGQLSHEGSWGHSRPPPPPY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00359 226 ProSiteProfiles PPC domain profile profile. 84 224 IPR005175 -
Arst6g00359 226 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 197 IPR014476 GO:0003680
Arst6g00359 226 Pfam Plants and Prokaryotes Conserved (PCC) domain 88 197 IPR005175 -
Arst6g00359 226 MobiDBLite consensus disorder prediction 1 84 - -
Arst6g00359 226 Gene3D - 87 201 - -
Arst6g00359 226 MobiDBLite consensus disorder prediction 31 58 - -
Arst6g00359 226 SUPERFAMILY AF0104/ALDC/Ptd012-like 84 197 - -
Arst6g00359 226 CDD DUF296 88 171 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00359 Arst-Chr6 3285818 3286673 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00359 1 197 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 62.981 6.10e-72 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00359 6 3285818 3286673 Arst6g00359 6 3285818 3286673 ECH