Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00332 ATGAATTGCTTTCCGTGCTTCACTTCTCAAAAAAGCAAGAAAAGCAGTAGCAGCAAGGATTTTTCTCCTCCTCCACAGGAACAGGAACAAGTTGTAGCAAGACCACCAGATATAAAGAAACCAAAGGCAGAAGACATAAACCAAGTAGACACATCGAATATTAAAGCACACAATTTCACATTCCGTGAGCTAGCAACTGCAACAAAGAATTTCCGGCAAGAAATGTTGATGGGTGAAGGTGGCTTTGGCAGAGTCTACAAGGGCACAATCCCTGCAACCGGCCAGGTGGTAGCAGTGAAGCAACTGGACCGAAATGGAATGCAAGGAGGAAGCAAGGAATTTCTGGTTGAGGTTTTGACTCTAAGCCTCATGAGCCATGAGAATCTCGTCAAACTCACTGGTTATTGTGCCGATGGTGATCAACGTCTTTTGGTGTATGAATTCATGCCTGCTGGCTCTCTAGAAAAGCGCCTTCTCGAGCGGGGACCGGAGCAACCTCCATTAGATTGGTACGTGAGAATGAAGATAGCATCTGATGCGGCAAAAGGACTATGGTACTTGCACGACATGGCGAATCCCCCTGTCATATTCAGGGACTTGAAATCCTCCAACATCTTGCTGGACAATGATAACAATGCAAAGCTATCCGATTACGGACTTGCAAAACTTGCTGGTAAAGATAAGATGAATATTGTTCCTACCAGAGTTATGGGCACCTATGGTTATAGTGCCCCTGAATACGTAAGAACAGGTCAACTCACCTTGAAGTCAGATGTCTATAGTTTCGGTGTTGTCTTGCTAGAGCTCATCACTGGACGCCGCGCAGTTGACACCACTAGACCCAACGACGAGCAAAATTTAGTTTCATGGGCGCAACCCATATTTAGAGACCCGAAAAAGTATCCAGAAATGGCAGATCCACTTCTGAAAGGCAAGTTTCCAGAGAAGGATCTGAATCAAGTTGTTGCAATAGCAGCCATGTGCCTACAGGAGGAATCAGCAGCGCGTCCTCTCATGAGTGATGTGGTGACTGCCCTCAGTTTTCTCTCAACAACTCCGCCTCCGGAGGCCAATCCTCAGCCTGAGCCTGAGCTTGATCCCGAGCCTGAGCCAGAGCCTGAGCCTGAGCCTGAGCCAGAGCCTGAGCCTAAGCCTATCCCTGCCCCTGCCCCTGCCCCTCTTTCTGCTGCGCGCTCGGCCAAGAGTGAAGCATCCGCAAGTGTGAGTGGCAGCGGCAGTGACAGCGCAAGTGATAGTGGAAGCTACAGCCAGAGCCAGAGCGATTATGATGGATCTGATGGTGAATCAGACTACTATGAAGAGGATGAAGATAAACGAAGCTACAGCCCACAAGATAGTATACAATCTAGGGAATTCTACTCCAAGTCAAGCCGCAAAAGCAGCACCAGATCATCGTCCAGGGCTCACAGCGATGTAACTTCGAATTCCGAAGATGAAAGGAGAGGACCATCCCCACGCAAAGCCAGTAGGAAACATTTAAGCCAGAAGATTAGCAAGAAGTCTTCCAGCAAGGAAAAAGAATTAGGCCAGAATAGCAGTAAGAAAGCTGCTTCTCGGAAGAACAGAGAATTAAAGCAGAAGAGTAGCAGAAACAAAGATAGAGAATTTAGCCAAAAGAGCAGTAAGAAAAAACCATCATCTTCTTCAAAGAGGAGAACCGGGGTGGGACCAGAAGAGTCAAAGTCAAGGGATGAAGGTGAAGCCATGCTTAGTGAGAGATCATCACGAGAGGATATATCTTACGGTCACGACAACCAAGAGAGTAGTGAGAGCATCCCATTCGAGTATGAACGCAGCAAGGAACCATCAGCTATCCCGCCATTGCCACCAACAGCAAGCACTCTCACATAA 1872 0.476 MNCFPCFTSQKSKKSSSSKDFSPPPQEQEQVVARPPDIKKPKAEDINQVDTSNIKAHNFTFRELATATKNFRQEMLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGMQGGSKEFLVEVLTLSLMSHENLVKLTGYCADGDQRLLVYEFMPAGSLEKRLLERGPEQPPLDWYVRMKIASDAAKGLWYLHDMANPPVIFRDLKSSNILLDNDNNAKLSDYGLAKLAGKDKMNIVPTRVMGTYGYSAPEYVRTGQLTLKSDVYSFGVVLLELITGRRAVDTTRPNDEQNLVSWAQPIFRDPKKYPEMADPLLKGKFPEKDLNQVVAIAAMCLQEESAARPLMSDVVTALSFLSTTPPPEANPQPEPELDPEPEPEPEPEPEPEPEPKPIPAPAPAPLSAARSAKSEASASVSGSGSDSASDSGSYSQSQSDYDGSDGESDYYEEDEDKRSYSPQDSIQSREFYSKSSRKSSTRSSSRAHSDVTSNSEDERRGPSPRKASRKHLSQKISKKSSSKEKELGQNSSKKAASRKNRELKQKSSRNKDREFSQKSSKKKPSSSSKRRTGVGPEESKSRDEGEAMLSERSSREDISYGHDNQESSESIPFEYERSKEPSAIPPLPPTASTLT 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00332 623 MobiDBLite consensus disorder prediction 363 377 - -
Arst6g00332 623 MobiDBLite consensus disorder prediction 505 548 - -
Arst6g00332 623 Pfam Protein kinase domain 72 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00332 623 MobiDBLite consensus disorder prediction 349 623 - -
Arst6g00332 623 Gene3D Phosphorylase Kinase; domain 1 41 148 - -
Arst6g00332 623 SUPERFAMILY Protein kinase-like (PK-like) 57 370 IPR011009 -
Arst6g00332 623 MobiDBLite consensus disorder prediction 1 44 - -
Arst6g00332 623 MobiDBLite consensus disorder prediction 452 478 - -
Arst6g00332 623 Gene3D Transferase(Phosphotransferase) domain 1 149 355 - -
Arst6g00332 623 MobiDBLite consensus disorder prediction 561 604 - -
Arst6g00332 623 FunFam Serine/threonine-protein kinase PBS1 149 362 - -
Arst6g00332 623 CDD STKc_IRAK 77 346 - -
Arst6g00332 623 PANTHER OS07G0668900 PROTEIN 3 354 - -
Arst6g00332 623 FunFam probable serine/threonine-protein kinase RLCKVII 43 148 - -
Arst6g00332 623 SMART serkin_6 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00332 623 ProSiteProfiles Protein kinase domain profile. 71 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00332 623 MobiDBLite consensus disorder prediction 400 432 - -
Arst6g00332 623 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00332 Arst-Chr6 2926785 2929118 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00332 1 378 Glycoside Hydrolase AT3G07070 61.340 1.10e-164 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Arst6g00332 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00332 - - ahf:112695353 772.311