Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00280 ATGGAGATGATGGATCACAGAAACTACAGCGGTAATATGTACAATCTGTTCGTGAAGCACTTGGACGGGAAAACCTTAACCCTAATATTCCCTTCTCCGATCCTCTTCGCCAAAACCATAAAGGATCGCCTCTTCGACCTTACCGGCATCCCGCCGCACCACCAACGCCTCGTAACCGGTTTCCGCCACCTCAACGATGAAGGATCGGCCATCTGCTCGCCGGATGAGGAGGAGGAGGAGCGGCGGCTGGAGAAGGTTGCGGAGGAGTTCCTGAAGAAGCAGATGAAGAAAGGTAAGAAGGGTGCTGGCGATGGAGAAGCTCACAAGTATGTTGCCAAGTATAGGGAAGAGTCTGAGCGCTGTGTCGCCGAGGTTGCAGAGTCTGTGAAGGAGGCTTTGAAGTCTCTCAATGGTAAGAGAAAGGGTTCTGAAGCTGCACTGGAGAAAGCTGATTCTAAGAAGTTGAAGATATGGATGGGGAAGAGAAAATTGAATGAAAGTGATAGTGACGATTCTGATGAGAGTGATGATGAAGGGGGGAATCAGAAATCCATTGTGTTGAATAGCCAGACTGAATCGGATACTAATAAGGCGGAAGGCAGTTCGGATTCAGTATCTTGTAAGAAACAGAGCGGAGACTCTTCTGGTGCAGGCTCTTGTGAAAGTGGATCTGAAGAGGAGAGAGAAACTGTACTAGAAGGCAAAGTAGAAGCTGTTGGATCCCCGTGTGGCGAGGCCACTGAGGCCAAACTCATTGATGCTGTTGAACCTGTTGTATATGAAGAGATGATAGGGGCTGCTACAATGCCTTGTTCAGAGTCAATAACTGTGATTAGTGTTGAAGATAATGGACATCAGGATTGCAATGGAGCTGTTGGTCAAGCCTCAGATAATCTAAGCTCAGAAAATGGGGCTGGTGCAAGCAAATCGAATGACATGGAGATTGATGAATCTCTTCAGCATAAAGCGTTAGTCCATGAAGAAATCTCACCAAGTACTAGCATTCCCGCATTGGAGGAGCCTCTGAATTTTGAAGCTTTTAATTCAGCTGCAGAGCTTGAGGTTCTTGGCTTGGAAAGGTTAAAATCTGAATTGCAATCTCGTGGGCTGAAATGTGGAGGAACTTTGCAGGAGCGTGCTGCCAGGCTTTTTCTTTTGAAATCCACTCCACTGGAGAAAATTCCAAAGAAGCTGCTTGCGAAGAAATGA 1209 0.4698 MEMMDHRNYSGNMYNLFVKHLDGKTLTLIFPSPILFAKTIKDRLFDLTGIPPHHQRLVTGFRHLNDEGSAICSPDEEEEERRLEKVAEEFLKKQMKKGKKGAGDGEAHKYVAKYREESERCVAEVAESVKEALKSLNGKRKGSEAALEKADSKKLKIWMGKRKLNESDSDDSDESDDEGGNQKSIVLNSQTESDTNKAEGSSDSVSCKKQSGDSSGAGSCESGSEEERETVLEGKVEAVGSPCGEATEAKLIDAVEPVVYEEMIGAATMPCSESITVISVEDNGHQDCNGAVGQASDNLSSENGAGASKSNDMEIDESLQHKALVHEEISPSTSIPALEEPLNFEAFNSAAELEVLGLERLKSELQSRGLKCGGTLQERAARLFLLKSTPLEKIPKKLLAKK 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00280 402 Coils Coil 133 153 - -
Arst6g00280 402 PANTHER SPLICING FACTOR SF3A-RELATED 75 401 - -
Arst6g00280 402 MobiDBLite consensus disorder prediction 157 239 - -
Arst6g00280 402 CDD Ubl_ubiquitin_like 16 67 - -
Arst6g00280 402 MobiDBLite consensus disorder prediction 181 221 - -
Arst6g00280 402 Gene3D - 2 72 - -
Arst6g00280 402 SUPERFAMILY Ubiquitin-like 10 67 IPR029071 -
Arst6g00280 402 MobiDBLite consensus disorder prediction 293 308 - -
Arst6g00280 402 Coils Coil 348 368 - -
Arst6g00280 402 MobiDBLite consensus disorder prediction 293 313 - -
Arst6g00280 402 Pfam Replication stress response SDE2 C-terminal 338 401 IPR025086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00280 Arst-Chr6 2506433 2508894 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00280 335 401 C2H2 Transcription Factor Family AT5G06160 46.269 1.96e-10 60.5