Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00273 ATGACGGAGTCACCGTCGGATAGGCGGTGTAAGCGCACCGCCGGCCCAAATTGGCGGTGCAGCGGGGTGGCGTCGCTGGGAAAATCGTTCTGCGAGAAACACTTGCAGCAGCGTGCGCTTCAAGACCAGAAACGCAGAATTAAGAGGAACGAAGGGAACGAATCAGAGCGCAGGTCCAACAAGACCAAGAGGAGGCTGTCGACCGCGGATGACGTCAGTGCCGGATCCGAATTGGAAGTTTCCGTGTCCGAATTGATTGAAAACTCCGTCAGAAAGAAAAAAAAGAACGAGACGAAGAAGAAGAAACCACTTGATCAAGAGAGTGTAAATGAGTGTGATATTCACGAGGACTCTGACAGGGGAATGATGAGCGTGAACGGTGTCAAGAAGGGTTCAGGAGTTGAAGATAAGAAACAAATGGGTAGCAAAAGCAACGAGGGTGGAAGTTTGATGTGTCATCAGTGCCAGAGGAATGATAAGAGTGGAGTTGTCTTTTGCTCAAAGTGCAACAGAAAACGCTACTGTTATGAATGCCTTGAGCGGTGGTACCCAGGTAAAACCCTGAAGGAAGTTGAGGAAGCATGTCCATTCTGTTTAGGCAATTGCAATTGCAAAGCCTGCTTGCGGGAGGTTCCGGTGCTTATGGACCGAGAGGTAAATTCCAGTGTCAAATTAAATCGACTGCGCTACTTACTCTATAAAGCCTTGCCTGTTCTGAGGCATATTCACAGGGAGCAAAGCTTAGAACTAGAGATTGAATCTAAAATAAGAGGTGAGCAACTGCAAGAAAAAGGCATAGCAAGAACAGAGCTAGACAAACGTGAGCGCTTATACTGTGACAATTGCAATACATCTATAATTGGGTTTTACCGGAGCTGCCCCAATCCCAGTTGCTCTTATGATCTATGTCTCATGTGTTGTCAAGAGCTTAGGGAGGGTTGCCAACCTGGAGGCATAGAAGCTGAAACATCCCAGGAACAATTTTCTGAGAGAGCTCGTAATCATGATTCATCAATAACTAAGAGTAAAAAACAAAGTAAAAGATATGGATGGGAGAGCCAGCTTGTGCCTACAAATTTTGATTTTCAAGCTGACATGTCCACCCCCTTCCCTGAATGGAATGCTAATACAGATGGTAACATTCCATGTCCACCAAAACAGCGTGGAGGATGTGGTACCACATTGCTAGAATTGAGACGTACTTTCAAATGTAACTGGGTAGTGAAATTGCTAAATAATGCTGAGGACCTCACCAGAGACTACACACCGCCTAATGTTGATATTACTGAAAAGTGCTCTTTATGTCAGATAAATACTATTGAAGGAAAAACCAATCTTGAAGCACGTAGGGCAGCATTCAGAGATGATGATAATGATAATTTCATATATAGCTCAAATGCCCGTGATATTTCTGATGATGAAATTGAGCATTTCCAGAGGCACTGGATGAGGGGAGAACCTGTTGTTGTGAGAAACATTCTAGATAAGACATCGGGTCTTAGCTGGGAGCCAATGGTTATGTGGAGGGCTTTAAGAGAAACAGGCTCCAAAGTGAAGTTTAAAGACGAAACTCGAAGTGTAAAAGCTATTGATTGCTTCGATTGGTGTGGGGTTGAGATCAATATTCACCAATTTTTCCAAGGCTACCTAGAAGGTCGAATGTATAACAATGGGTGGCCAGAAATGCTGAAATTGAAAGATTGGCCCACATCCACCACTTTTGAAGAGCGCTTGCCTAGGCATGGCACAGAGTTCCTCATGGCACTCCCCTACAGGGATTACACTGATCCAAAATCTGGGACTTTGAATTTTGCCTCTAAACTTCCTGATGACTCACTAAAGCCGGATTTAGGACCTAAAACATATATTGCTTATGGATTTTCTGATGAGCTTGGTAGAGGAGATTCTGTGACAAAGCTGCACTGTGATGTGTCAGATGCAGTCAATGTGTTGATGCATACAACCAAAGTGGAGATAGCTCCTTGGCGGAGAAAAATAATAAAAGAATTGCAGAAAAAATATGCCGAAGAAGACTCTCGTGAACTTTTATGTGAAGCTTTAGGAGATGCTGATGAAAGACCTAAATCTGAAGCATTGAGCCATGATCAGAAGGCAGACATTGGAATTGGTAATATTTCACCAACTAGCCACGTGGATCAGTGCATTCCATCTATATGTGAAGAAGGCAAGAGTCAGAAGTTAGAAACACATGATCTATCTGCAAGTAGCTTAGCTAGTAATATGAGCAATAAGGAAGACAGAATGAGGATTGATTTTATAGATGATAAGGAGCCTGATGGTCCTGAGCTGAGAGAGTCAAAACAAGGCCTGGAGAAAGATACTTTGCAAACTGAAGATGGAGCTGAGGTTGCCCTCGGTGGTGCTGTTTGGGACATCTTCCGCCGGCAAGATGTCCCTAAGCTAATTGAGTACTTAAGAAAGCACAAGAATGAATTCCGTCATATAAAAAATCATCCTGTAGATTCTGTTATACATCCTATTCATGATCAAACTCTGTTTTTAAATGAGAGGCATAAGAAACAGCTGAAAAAGGAGTTCAATGTTGAACCATGGACCTTTGAGCAACACCTTGGGGAGGCTGTCTTCATTCCAGCAGGATGTCCTCATCAAGTGAGAAACAGACAATCTTGTATAAAGGTTGCTCTTGATTTCGTTTCTCCGGAAAATGTTGGAGAATGTTTACGATTAACTGAAGAGTTTCGTTTGCTCCCAAAACACCACAGAGCCAAGGAAGACAAATTGGAGGTTAAGAAGATGACGCTTTATGCTGTAAGTAATGCTGTTAGACAAGTCAAACAAATAATACCGGTCAACGAGTAA 2841 0.4308 MTESPSDRRCKRTAGPNWRCSGVASLGKSFCEKHLQQRALQDQKRRIKRNEGNESERRSNKTKRRLSTADDVSAGSELEVSVSELIENSVRKKKKNETKKKKPLDQESVNECDIHEDSDRGMMSVNGVKKGSGVEDKKQMGSKSNEGGSLMCHQCQRNDKSGVVFCSKCNRKRYCYECLERWYPGKTLKEVEEACPFCLGNCNCKACLREVPVLMDREVNSSVKLNRLRYLLYKALPVLRHIHREQSLELEIESKIRGEQLQEKGIARTELDKRERLYCDNCNTSIIGFYRSCPNPSCSYDLCLMCCQELREGCQPGGIEAETSQEQFSERARNHDSSITKSKKQSKRYGWESQLVPTNFDFQADMSTPFPEWNANTDGNIPCPPKQRGGCGTTLLELRRTFKCNWVVKLLNNAEDLTRDYTPPNVDITEKCSLCQINTIEGKTNLEARRAAFRDDDNDNFIYSSNARDISDDEIEHFQRHWMRGEPVVVRNILDKTSGLSWEPMVMWRALRETGSKVKFKDETRSVKAIDCFDWCGVEINIHQFFQGYLEGRMYNNGWPEMLKLKDWPTSTTFEERLPRHGTEFLMALPYRDYTDPKSGTLNFASKLPDDSLKPDLGPKTYIAYGFSDELGRGDSVTKLHCDVSDAVNVLMHTTKVEIAPWRRKIIKELQKKYAEEDSRELLCEALGDADERPKSEALSHDQKADIGIGNISPTSHVDQCIPSICEEGKSQKLETHDLSASSLASNMSNKEDRMRIDFIDDKEPDGPELRESKQGLEKDTLQTEDGAEVALGGAVWDIFRRQDVPKLIEYLRKHKNEFRHIKNHPVDSVIHPIHDQTLFLNERHKKQLKKEFNVEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVGECLRLTEEFRLLPKHHRAKEDKLEVKKMTLYAVSNAVRQVKQIIPVNE 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00273 946 ProSiteProfiles JmjC domain profile. 597 908 IPR003347 -
Arst6g00273 946 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 40 941 IPR045109 GO:0032454|GO:0033169
Arst6g00273 946 MobiDBLite consensus disorder prediction 100 123 - -
Arst6g00273 946 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 40 941 IPR045109 GO:0032454|GO:0033169
Arst6g00273 946 MobiDBLite consensus disorder prediction 37 70 - -
Arst6g00273 946 Gene3D Cupin 464 917 - -
Arst6g00273 946 ProSiteProfiles WRC domain profile. 4 52 IPR014977 -
Arst6g00273 946 MobiDBLite consensus disorder prediction 324 345 - -
Arst6g00273 946 MobiDBLite consensus disorder prediction 37 74 - -
Arst6g00273 946 MobiDBLite consensus disorder prediction 90 145 - -
Arst6g00273 946 ProSiteProfiles Zinc finger RING-type profile. 152 198 IPR001841 -
Arst6g00273 946 MobiDBLite consensus disorder prediction 761 781 - -
Arst6g00273 946 FunFam Transcription factor jumonji (JmjC) domain-containing protein 728 917 - -
Arst6g00273 946 MobiDBLite consensus disorder prediction 326 345 - -
Arst6g00273 946 Pfam JmjC domain, hydroxylase 792 891 IPR003347 -
Arst6g00273 946 SMART cupin_9 578 908 IPR003347 -
Arst6g00273 946 Pfam WRC 7 44 IPR014977 -
Arst6g00273 946 SUPERFAMILY Clavaminate synthase-like 474 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00273 Arst-Chr6 2412194 2421088 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Arst6g00273 JmjC 5.3e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00273 K15601 - cave:132187182 1108.2