Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00265 ATGGCGAATCTGGAGTGCAATCTGAGGGGACCTCCCACTCCTACAGCTCAAACAGTTTGGATAGGTGAGGGAGATGAAGATCTCTACACAGAGCTATGGAAGCTGTGTGCAGGGCCTCTCGTGGATGTTCCCCGCACTGGGGAGAGAGTCTACTACTTCCCTCAGGGTCACATGGAACAATTGCAAGCATCAACGAATCAGGAGGTGAACCAAGAACTGAGTCAGCAAATCCCTCATTTCAATCTTCCAACCAAGATTCTCTGCCGTGTTGTTCACATTCAGTTGCTGGCGGAACAGGAAACTGATGAAGTTTATGCCCGTATCACTTTGCTTCCAGAACCAGATCAAAAAGAGCCTACAATCCCTGATCCAAGTCCCGTGGAATCTCAAAGAGAAACGTTTCACTCTTTTAGCAAGATATTAACTCCCTCTGATACTAGCACACATGGAGGATGTTCAATTCGGCGTATGCATGCCACAGAGTGCCTACCTCCATTGCCATCACCTCCATCGGATGCAGATGAAAATTCCCCACCACCATCCCAGGAGTTGGTGGCGAAGGATCTTCATGGGTTCGAGTGGAAGTTTAAGCATGTATTAAGAGGTAAAGGAGATAAAGGAGGTTCACCAAAGAGGCACTTGTTCACAACTGGCTGGAGTACTTTTGTCACTTCCAAAAGACTGGTTGCTGGAGATGCTTTTGTGTTTTTAAGGGGAGAAGATGGGGAAATGAGAGTTGGGATTAGGCGTCTTGCGCGGCAGCAGATCCCAATGCCTTCGTCCGTGATATCAAGCCAGAGTATGCATCTTGGAGTGCTTGCCACTGCTTCCCATGCTGTTATGACTCGCACCATGTTTGTGGTTTATTATAAACCAAGGAGTAGCCAGTTTATTATTGGCCTTAACAAATATCTGGAAGCAGTCAAAAATAAATTTACTGCTGGAATGCGTTACAAGATGAGGTTTGAAGTGGAAGAATCACCTGAGAGAAGATTTTCTGGTACTATTGTTGGGGTTGGGGATGTATCGCCAGGATGGTCAAACTCTCAATGGCGTTCCTTGAAGGTTCATTGGGATGAGCCGGCAACGTTTCCGAGACCAGAGAGGGTTTCTGCTTGGGAGATAGAGCCTTTTGTTGTCTCTACTGCGTTGGCCAAAAGGCCCAGGCATGCTGATCATACTTCATCATCTGAAATTGCTTCCAACACCCCTGCTTCTGCTTTTTGGTTTCATGGATCATCCATGTCCCATGATCCTGCAGAATTAGGTGGTGCTGAAGTCCAATGCAAGGAAAACCAGGTTGTATGGTCCTTGAGGCAGAAAGAAACCAATGGCAATCCCATGAATAGCCACTCCAGTAGCTCTCGGGTTCGTATGGAAGGAATATGGTCTAATTCACCACATGTGAGTGTCCCACCAAACCCCCCAAACAACAATGCTGCTGCAAAACAAGGCCTTTCACCTATTTCATCTAAACCGAATGATGATGGTTTGACTCATGATAAAGTTGAAGTAGATGGTAGAAAGAAGACTGAGAATCCCACCAAGATCTTTTTATTTGGAGTTAATTTGACTAACAACTTCCGTAGTAATGTGTCCCTTCCGGAGAAAGAACAGGCTTGCTCTGCCATTGTTCCCATTGGTCCCAAAGAATCTACTCCCATTACCATTACTGCATCAGCCACTCAGAATGCTCAGAATTCCAACTATTCAGTGTCCGATAAGGAGCAACAGAACCAAATTTCTTCTGATGTATTGCCAGCAGAGAAGCCTAGCAAGCTGGCATCCTTACCATCCATGAGGACTCGAACTAAGGTGCAAATGCAAGGTGTAGCTGTAGGGAGAGCTGTGGACCTAACCATGTTGAATGGCTATGACGAGCTTACAATTGAGCTTGAGAAACTGTTTCATATTGAGGGAGAACTCCGATCACAAAACAAATGGGCAGTTACTTTTACTGATGATGAAAATGACATGATGCTTGTTGGTGATGATCCATGGCCGGAGTTCTGCAACATTGTGAAACGGATTTACATTTATTCAAGGGAGGATGTGAAGAAGATGAAGTATAAACTCTCCGTGCCTTCGTCGGACTGCGAAGAGACTTTGTTGTCGAAAGAAGAGACTTAA 2130 0.4554 MANLECNLRGPPTPTAQTVWIGEGDEDLYTELWKLCAGPLVDVPRTGERVYYFPQGHMEQLQASTNQEVNQELSQQIPHFNLPTKILCRVVHIQLLAEQETDEVYARITLLPEPDQKEPTIPDPSPVESQRETFHSFSKILTPSDTSTHGGCSIRRMHATECLPPLPSPPSDADENSPPPSQELVAKDLHGFEWKFKHVLRGKGDKGGSPKRHLFTTGWSTFVTSKRLVAGDAFVFLRGEDGEMRVGIRRLARQQIPMPSSVISSQSMHLGVLATASHAVMTRTMFVVYYKPRSSQFIIGLNKYLEAVKNKFTAGMRYKMRFEVEESPERRFSGTIVGVGDVSPGWSNSQWRSLKVHWDEPATFPRPERVSAWEIEPFVVSTALAKRPRHADHTSSSEIASNTPASAFWFHGSSMSHDPAELGGAEVQCKENQVVWSLRQKETNGNPMNSHSSSSRVRMEGIWSNSPHVSVPPNPPNNNAAAKQGLSPISSKPNDDGLTHDKVEVDGRKKTENPTKIFLFGVNLTNNFRSNVSLPEKEQACSAIVPIGPKESTPITITASATQNAQNSNYSVSDKEQQNQISSDVLPAEKPSKLASLPSMRTRTKVQMQGVAVGRAVDLTMLNGYDELTIELEKLFHIEGELRSQNKWAVTFTDDENDMMLVGDDPWPEFCNIVKRIYIYSREDVKKMKYKLSVPSSDCEETLLSKEET 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00265 709 SMART B3_2 137 252 IPR003340 GO:0003677
Arst6g00265 709 SUPERFAMILY DNA-binding pseudobarrel domain 128 279 IPR015300 -
Arst6g00265 709 Pfam AUX/IAA family 586 683 IPR033389 -
Arst6g00265 709 Pfam Auxin response factor 276 355 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Arst6g00265 709 SUPERFAMILY CAD & PB1 domains 596 677 - -
Arst6g00265 709 MobiDBLite consensus disorder prediction 475 494 - -
Arst6g00265 709 Pfam B3 DNA binding domain 137 250 IPR003340 GO:0003677
Arst6g00265 709 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 27 689 IPR044835 GO:0003677|GO:0006355|GO:0009725
Arst6g00265 709 Gene3D - 134 251 IPR015300 -
Arst6g00265 709 FunFam Auxin response factor 135 252 - -
Arst6g00265 709 ProSiteProfiles PB1 domain profile. 601 684 IPR000270 GO:0005515
Arst6g00265 709 MobiDBLite consensus disorder prediction 160 183 - -
Arst6g00265 709 CDD B3_DNA 135 250 IPR003340 GO:0003677
Arst6g00265 709 Gene3D - 311 383 - -
Arst6g00265 709 MobiDBLite consensus disorder prediction 464 504 - -
Arst6g00265 709 FunFam Auxin response factor 311 382 - -
Arst6g00265 709 ProSiteProfiles B3 DNA-binding domain profile. 137 252 IPR003340 GO:0003677
Arst6g00265 709 FunFam Auxin response factor 596 689 - -
Arst6g00265 709 Gene3D - 597 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00265 Arst-Chr6 2235464 2239853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00265 24 688 B3 DNA Binding Superfamily AT4G23980 52.600 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Arst6g00265 B3 2.2e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00265 K14486 - gmx:100820503 857.055