Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00254 ATGGAAGGAATATCTGGGAATTCTTCATGCACAGCAAGGCCAGTGTTGGAGAAGAAAGCAAGGCCACAAGAGCAATTGAACTGTCCAAGGTGCAATTCAACCAACACAAAGTTTTGTTACTATAACAATTATAGCCTCACTCAGCCCAGGTACTTCTGCAAGACTTGCAGAAGGTACTGGACTGAGGGAGGCTCTCTTCGCAACGTCCCTGTTGGTGGCGGTTCAAGGAAGAATAAGAAGATCATCTCATCATCAGCTTCTTCTTCTTCTTCTTCTCTATCGTCATCTTCTGTACCAAAGGTTCCAGATTTGAACCCACCACAAAACCCTAATAATAAAATGATGCAAGGAGGAGGGCATGATCTCAATTTAGCTTTTCCAGCTATGGACAACTTTCATCATCATGCTTTGTCTGCATATGTTGAGATTCCGAAACTCGAAACCGGAGGAGGAGGAGGAGGAGGTGATGGATCTTCTTCTACTGCTGCTGCTGCTGCTGTTGCTCCAAGTTCTCTATCAGCGATTGAGTTGCTAAGGTCTTCTGGGATGGCTGCTCCTTATGTCCATTCTTCATTGATGCCAAATTCAAATGCTCTTTACCCTTCTGGGTTTCCCATGCAAGAGATTAAGCCCAGTCTTGGGTTTTCTTTGGTTGATGGTGGGCAAGTAGAGAATAATGATAATCATAATAATGGGAGGCTTCTGTTCCCTTTTGGAGTTGACCAAAACAACAAACAACAAGCTGGGAACAATTCAACTGGGTATTGGACTGGTATTATTGGTGAAGGCTCATCATGGTAA 801 0.4382 MEGISGNSSCTARPVLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKIISSSASSSSSSLSSSSVPKVPDLNPPQNPNNKMMQGGGHDLNLAFPAMDNFHHHALSAYVEIPKLETGGGGGGGDGSSSTAAAAAVAPSSLSAIELLRSSGMAAPYVHSSLMPNSNALYPSGFPMQEIKPSLGFSLVDGGQVENNDNHNNGRLLFPFGVDQNNKQQAGNNSTGYWTGIIGEGSSW 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00254 266 ProSiteProfiles Zinc finger Dof-type profile. 26 80 IPR003851 GO:0003677|GO:0006355
Arst6g00254 266 MobiDBLite consensus disorder prediction 67 120 - -
Arst6g00254 266 ProSitePatterns Zinc finger Dof-type signature. 28 64 IPR003851 GO:0003677|GO:0006355
Arst6g00254 266 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 178 IPR045174 GO:0003700|GO:0006355
Arst6g00254 266 Pfam Dof domain, zinc finger 24 80 IPR003851 GO:0003677|GO:0006355
Arst6g00254 266 MobiDBLite consensus disorder prediction 78 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00254 Arst-Chr6 2120402 2122018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00254 18 266 C2C2-Dof Transcription Factor Family AT3G61850 45.324 1.03e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Arst6g00254 zf-Dof 2.5e-33 No_clan