Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00250 ATGAAAGCCATAAAAGGTTGGGCTCGACAAATTCTTCAAGGTCTGGTATATCTTCACGGTCACAAGCCGCCTATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTAAATGGGAACCATGGAGAAGTCAAGATCGGAGATCTCGGTTTGGCAACTGTCATGCAGCAACCAACTGCTCGAAGTGTTATTGGGACCCCCGAGTTTATGGCTCCAGAACTATATGAAGAGGAATACAATGAACTCGTGGATGTCTATTCTTTTGGGATGTGCATGTTGGAAATGGTTACTTTTGAGTACCCGTATAGCGAATGCAAGAATCCAGCTCAAATTTACAAGAAAGTTACCTCTGGCATCAAACCGAATTCCCTTAACAGGGTGAGTGATCCCCAAATTAAGGAGTTTATCAACAAATGTCTTGTTCCTGCATCTGAGAGGTTGTCTGCAGAGGAGCTTCTTAGAGACCCATTTCTGCAAGTCGAGTGTTCCAAGGATCCAATCCTTAATCCCTTAAACTCACCTACTAAATCTCCAAAGGCTATAGATAAGCCGAAATCTGGTCCTTTGTCTATAGACTTCGAGGCTGACTCCAAACATGTGTCTGTGATTACCTGTGCTGAAAACAGCCATGGAAGTTCACATTGTCCACTTCTGGAAGTTCGGCGTACATATAAAAACAATGAGTTTAAATTGAAAGGGACCAAAAATGATGATATCACGGTGTCATTAATCTTGCGTATTGCTGATTCTTGTGGTCAAGTAAGGAATATACATTTCCTCTTCTACCTTGAGACAGATACTGCAGTTTCTGTGGCATCAGAGATGGTTGAAAATTTGGAGCTGTCCGATCATGATGTAGCCTTCATAGCTGAGCTTATTGATTACTTGATAATGAAGCTATTACCTCGGTGTAAGCCGCCGAATGAAGGAAATAGTCATAGTCAGTGTCCTGTGCCAAGCAGTCCTCGCACTGAAGTGATTTTTGATCAAGACAACGCACAGCGTCCTGTCCAAACCAATGTTCCCTCTGAATTGGTTTTCAGTCCTGTCCAAACCAATGCTCCCTCTGAATTGGTTTTCAATCAAGAGAACTCGACTCCAGTTGATTCTAACCAAGCAGAAGATTTTGAGACAGCCAACAGAAGCTTTGTGTTTAACAATGGTGATAATGCTGCTTTTGTTGGTGAGTATAATTCTTCTCCAAGTTTGAGTAGCTTGGAAGATCAAGATTGGCAAGAACCGGCAGAGGCTGATATAGCCATTGAAGATGCTTGCATGAAAAATGAATACTGTCTTGATTCTGACGCTGATAGGAGTGAGAAGGGATTAAGTTGGTCAACCTTAGAAATGAAGCTGGCTGATACATTCTGGGAATGTTGTAAATTGCAGGCTACAAACTGTGCTGCAGAAAGCATTGTGCTGAAAGGAATCTCAAAGAACTCTTCTCACTCTACAATCCCAGCCTTTTGGGGAACACCTAATGCTTTGAGCTTGACAAGCAGCAATTCTTCTTGGTCTCCAACCGACAAAGACATCGAGCACGAGCTAAAGCATGAACTCGATGCGATCGAATTACACTATGAGCTTTGGTTCCAAGAACTTTCAAGACAGAAGTTGGAAGCATTGGAAGCCACCAGAAAGAAATGGACAGAAAGGAAGAAACTGATTGTTCATTGA 1677 0.4222 MKAIKGWARQILQGLVYLHGHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLATVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYSECKNPAQIYKKVTSGIKPNSLNRVSDPQIKEFINKCLVPASERLSAEELLRDPFLQVECSKDPILNPLNSPTKSPKAIDKPKSGPLSIDFEADSKHVSVITCAENSHGSSHCPLLEVRRTYKNNEFKLKGTKNDDITVSLILRIADSCGQVRNIHFLFYLETDTAVSVASEMVENLELSDHDVAFIAELIDYLIMKLLPRCKPPNEGNSHSQCPVPSSPRTEVIFDQDNAQRPVQTNVPSELVFSPVQTNAPSELVFNQENSTPVDSNQAEDFETANRSFVFNNGDNAAFVGEYNSSPSLSSLEDQDWQEPAEADIAIEDACMKNEYCLDSDADRSEKGLSWSTLEMKLADTFWECCKLQATNCAAESIVLKGISKNSSHSTIPAFWGTPNALSLTSSNSSWSPTDKDIEHELKHELDAIELHYELWFQELSRQKLEALEATRKKWTERKKLIVH 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00250 558 SMART serkin_6 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00250 558 Coils Coil 532 552 - -
Arst6g00250 558 Gene3D - 239 318 - -
Arst6g00250 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 25 37 IPR008271 GO:0004672|GO:0006468
Arst6g00250 558 Gene3D Transferase(Phosphotransferase) domain 1 1 164 - -
Arst6g00250 558 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 551 - -
Arst6g00250 558 Pfam Protein kinase domain 2 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00250 558 SUPERFAMILY Protein kinase-like (PK-like) 3 159 IPR011009 -
Arst6g00250 558 FunFam probable serine/threonine-protein kinase WNK9 1 163 - -
Arst6g00250 558 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00250 558 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 241 297 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00250 Arst-Chr6 2084039 2087299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00250 1 305 MAP Kinase Kinase Kinase AT1G49160 59.133 9.65e-126 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Arst6g00250 Pkinase 2.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00250 K08867 - qsa:O6P43_027404 607.831