Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00244 ATGAGGCCGGTTTTCGTTGGGAACTTTGAGTACGATACTCGTCAGTCAGAGCTTGAACGCTTGTTCGCCAAGTATGGCAGGATTGAGCGCGTTGACATGAAATCTGGGTTTGCTTTTGTCTATTTTGAGGATGAGCGAGATGCTGAAGATGCAGTTCGTGCTCTTGACAACTTTCCATTTGGTTATGAGAAGCGAAGGCTGTCTGTAGAGTGGGCTAGGGGTGAACGCGGTCGCCATCGTGATGGCTCAAAGTCAAACCAGAGGCCCACAAAAACACTATTTGTGATTAATTTTGATCCAATTCGCACCCGAGTTCGTGACATAGAAAGACATTTTGAACCTTATGGGAAGGTTCTTCATGTTCGCATTCGTCGTAACTTTGCATTTGTGCAGTTTGAAACACAAGAAGATGCTACTAAAGCTCTTGAGTGTACACATATGAGCAAGATATTGGATAGAGTAGTGTCTGTTGAGTATGCTCTGAGGGATGATGATGAAAAGGGTGACAGATATTATGACAGTCCTAGAAGAGGAGGTTATGGGAGATCACCCAGTCCAGGTTATAGGAGGAGACCGAGCCCTGACTATGGCCGTCCACGCAGTCCTGTATATGATAGGTACAATGGTCCAGCCTATGATAGGCGTAGGAGCCCTGAATATGGTAGGCCTCGGAGCCCTGACTATGGTAGGAACAGGAGTCCTGAATATGGGAGACATCGCAGTCGAACACCAATTCGAAGATCCAGAACTTAG 753 0.4648 MRPVFVGNFEYDTRQSELERLFAKYGRIERVDMKSGFAFVYFEDERDAEDAVRALDNFPFGYEKRRLSVEWARGERGRHRDGSKSNQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLHVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDDEKGDRYYDSPRRGGYGRSPSPGYRRRPSPDYGRPRSPVYDRYNGPAYDRRRSPEYGRPRSPDYGRNRSPEYGRHRSRTPIRRSRT 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00244 250 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 91 240 - -
Arst6g00244 250 MobiDBLite consensus disorder prediction 166 250 - -
Arst6g00244 250 FunFam Serine/arginine-rich splicing factor RS31 85 173 - -
Arst6g00244 250 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 4 60 IPR000504 GO:0003723
Arst6g00244 250 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 155 IPR000504 GO:0003723
Arst6g00244 250 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 2 74 IPR000504 GO:0003723
Arst6g00244 250 CDD RRM2_AtRSp31_like 92 161 - -
Arst6g00244 250 SUPERFAMILY RNA-binding domain, RBD 2 165 IPR035979 GO:0003676
Arst6g00244 250 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 162 IPR000504 GO:0003723
Arst6g00244 250 Gene3D - 1 82 IPR012677 -
Arst6g00244 250 Gene3D - 83 172 IPR012677 -
Arst6g00244 250 MobiDBLite consensus disorder prediction 209 241 - -
Arst6g00244 250 SMART rrm1_1 3 70 IPR000504 GO:0003723
Arst6g00244 250 SMART rrm1_1 92 158 IPR000504 GO:0003723
Arst6g00244 250 FunFam Serine/arginine-rich splicing factor RS31 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00244 Arst-Chr6 2076751 2079561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00244 4 168 Eukaryotic Initiation Factors Gene Family AT1G49760 24.731 9.58e-10 56.6