Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Arst6g00243 | ATGATGGTTCTGGATGCATTGAATTCTGGTCCTACTGCAGAAGCCATTTCTCAAATTATAGATACCATCGCTGAGTTTCTATATTATGCTAGTGATGTTCTTGTGAAGAAGGATAGTTTTAAGGAACTTTCAGCTTACTTGGAAAGGATTTCACCCATTTTAAAAGCATTGAAGAAAGGAAAAGTGAGCGATTCTGAAAAATTCAACCATGCCATTGAGATTCTGAGTCGTGAAGTTAGAGATGCAAAGCAACTGGCTGAAGAATGCAGCAAGAAGAACAAGGTATATCTCCTAATGAACTGCAGAACCATTATCAAGCGCCTCCAAAATATCACTAGTGAGATTAGCAGGGTAATTGGTCTTCTTCCTTTGGCCACACAAGGCCTTTCTAATGGAATAATTGAAGAAATTACAAAGCTATGTGAGAATATGCAGGCAGCTGAGTTTAAGGCAGCCATAGCAGAAGAAGAGATTTTAGAGAAAATTGAGTCAGGGATACAGGAAAAGAATGTAGATCGCTCCTATGCAAATGCTTTGTTGGTTCTCATTGCAGATTCTGTTGGGATTACAAATGAGAAATCAACAATGAAGAAGGAACTTGACGAGTTCAAGAGTGAAATCGAAAATGCCAGGCTAAGGAAGGACCTAGCTGAGGCCATACAAATGGATCAGATCATTGCTTTGTTAGAAAGAGCTGATGCAGCTTCATCACCTAGGGAAAAGGAACGCAAGTACTTTGACAAACGCAGATCTTTGGGAAGCCAACCCTTGGAACCATTACAGTCTTTTTATTGCCCCATTACCCGGGATGTCATGGTTGATCCTGTGGAAACTTCATCAGGTCAAACATTTGAGAGAAGTGCAATTGAGAAGTGGTTTGCAGATGGAAACAAATTGTGTCCTCTAACCATGGTTCCTTTAGACACATCAGTTTTGAGACCCAACAAAACCTTGAAACAATCAATAGAAGAATGGAAAGATAGAAATACAATGATTACAATTGCTTCAATGACTGAAAAAATTCAATCAGGAGATGATGAGGAAGTACTGCATTGTTTACAGAAGCTTCATGACTTGTGCGAACAAAAGGGCCAGCACAGAGAATGGGTTTTACTGGAGAATTACATTCCAGTTCTTATCCGATTACTCAATGCTAAAAACCGTGATGTCAGGAATAATGCCCTTGTCATCCTTTGCTTGCTGGCAAAGGATAGTGAAGATGCTAAGGAAAGAATTGCTAAAGTTGATAATGCAATTGAGTCTATCGTGCATTCTCTTGGTCGTCGTTTGGGGGAAAGGAAATTAGCAGTGGCATTACTTCTAGAACTATCCAAATATGATTTACTGAGAGAACATATTGGAAAAGTTCAAGGTTGCATACTGTTATTGGTGACTATGTCCAGCAGTGATGACAATCAATCTGCTAGAGATGCAACAGAGCTGTTGGAAAAACTTTCATATTCTGACCAGAATGTTATACAGATGGCAAAAGCCAATTATTTCAAGCAGTTACTGCAGCGTCTCTCCACAGGGTCAGACGAGGTGAAGATGTTGATGGCCACGACTTTAGCGGAAATGGAGTTAACTGACCATAATAAGGAGTCCTTGTTTGAAAGTGGTATACTTGCTCCTCTTCTTCACTTGGTCTCACATAATGATGTTCAGATGAAAATAGTGGCCCTTAAAGCTCTTCAGAATCTATCCAGTTTAAAGAAAAATGGACTGGAAATGATTCGACAAGGTGCAACACGTCCGCTACTTAACATTCTTTTCCAGCACAGCATTCCATCTTCAAGTTTGTGGGAACATGTAGCGCCAATAATTATGCAGCTTGCTGCATCGACGATGTCACAAGATGCACAGACACCAGTTTCATTGCTAGAATGTGATGAGGATGTTTTTAACCTTTTCTCTCTAATTACTTATAACGTGCCTGATGTGCGGCAATACACTATCCAGACTTTTTATGCCCTGTGCCAATCGCCCTCAGCTTCTTATATTAGAACCAAGCTAAGAGAGTGCACAGCTGTCCAAGTACTGGTTAAGTTGTTTGAGACTGAAAACCAAAAACTACGAGGAAGTGCGGTAAAGCTTTTCTCTTGCCTTGTAGAAGGTTGTGATGAAGCCATCATACTAGAGAATGTGAATGAGAAGTGCATTGAGACTTTGGCCAGAATCCTGAAATCATCTTCTGATGAAGAAGAAATAGTTTCTACTATGGGAATAATTTGCAGTTTGCCGGAAAATCACCAGATCACTCAGTGGCTTTTGGATGCTGGTGCCCTGGTGACTATTTATAACTATATCCAAGAAGGGAAGGACAAAGATCTTCAAAGAAGCAAGCTGGTAGAGACTTCTGTTAGTGCCCTATGTCGATTTACAGTGCCAACAAACTTGGATTGGCAAAAGAGAGCAGCAGAGATTGGGATTATAACTATTCTAGTGCAGTTGCTTGAAAGTGGAACCATGTTAACAAAACAACAAGCAGCATTGTCTCTTGCTCAGTTTTCTAAAAGTTCACAGGGGCTGAGCAGGCCATTGCCGAAGCGCAAGGGACTCTGGTGCTTCTCATCCTCGGCAGCTGAAAGTGGATGCTTAGTACATGGGGGCCTGTGCACTGTCAAAACCTCATTTTGCCTTTTGGAGGCTGATGCAGTAGTACCACTAACGAAGGTTCTTGGGGAATCTGATCCGGGAGCTTGCGAAGCTTCTTTAGATGCTCTATTAACTTTAATTGAAGGTGAAAGACTACACAGTGGTAGTAGAGTGCTTGCAGATGCAAATGCCATACCACTTATAATCAGATTCCTTGGTTCCCCTTCTCCTGGATTGCAGGACAAGTCTCTGCATGCTCTGGAAAGGATTTTTAGGCTAGTGGAGTATAAACAACAGTATGGACCCTCAGCTCAAATGCCTCTAGTTGACTTGACTCAACGCGGTAATGGTAGCATAAGATCCATGGCAGCTAGAATATTAGCACATTTGAATGTCCTGCATGATCAATCTTCATATTTCTAA | 3018 | 0.4112 | MMVLDALNSGPTAEAISQIIDTIAEFLYYASDVLVKKDSFKELSAYLERISPILKALKKGKVSDSEKFNHAIEILSREVRDAKQLAEECSKKNKVYLLMNCRTIIKRLQNITSEISRVIGLLPLATQGLSNGIIEEITKLCENMQAAEFKAAIAEEEILEKIESGIQEKNVDRSYANALLVLIADSVGITNEKSTMKKELDEFKSEIENARLRKDLAEAIQMDQIIALLERADAASSPREKERKYFDKRRSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFADGNKLCPLTMVPLDTSVLRPNKTLKQSIEEWKDRNTMITIASMTEKIQSGDDEEVLHCLQKLHDLCEQKGQHREWVLLENYIPVLIRLLNAKNRDVRNNALVILCLLAKDSEDAKERIAKVDNAIESIVHSLGRRLGERKLAVALLLELSKYDLLREHIGKVQGCILLLVTMSSSDDNQSARDATELLEKLSYSDQNVIQMAKANYFKQLLQRLSTGSDEVKMLMATTLAEMELTDHNKESLFESGILAPLLHLVSHNDVQMKIVALKALQNLSSLKKNGLEMIRQGATRPLLNILFQHSIPSSSLWEHVAPIIMQLAASTMSQDAQTPVSLLECDEDVFNLFSLITYNVPDVRQYTIQTFYALCQSPSASYIRTKLRECTAVQVLVKLFETENQKLRGSAVKLFSCLVEGCDEAIILENVNEKCIETLARILKSSSDEEEIVSTMGIICSLPENHQITQWLLDAGALVTIYNYIQEGKDKDLQRSKLVETSVSALCRFTVPTNLDWQKRAAEIGIITILVQLLESGTMLTKQQAALSLAQFSKSSQGLSRPLPKRKGLWCFSSSAAESGCLVHGGLCTVKTSFCLLEADAVVPLTKVLGESDPGACEASLDALLTLIEGERLHSGSRVLADANAIPLIIRFLGSPSPGLQDKSLHALERIFRLVEYKQQYGPSAQMPLVDLTQRGNGSIRSMAARILAHLNVLHDQSSYF | 1005 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Arst6g00243 | 1005 | Coils | Coil | 193 | 220 | - | - | |
| Arst6g00243 | 1005 | Coils | Coil | 137 | 157 | - | - | |
| Arst6g00243 | 1005 | Gene3D | - | 630 | 996 | IPR011989 | - | |
| Arst6g00243 | 1005 | CDD | RING-Ubox_PUB | 263 | 312 | IPR045210 | - | |
| Arst6g00243 | 1005 | Gene3D | - | 330 | 430 | IPR011989 | - | |
| Arst6g00243 | 1005 | SMART | Ubox_2 | 262 | 325 | IPR003613 | GO:0004842|GO:0016567 | |
| Arst6g00243 | 1005 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 261 | 329 | IPR013083 | - | |
| Arst6g00243 | 1005 | Coils | Coil | 72 | 92 | - | - | |
| Arst6g00243 | 1005 | Pfam | Armadillo/beta-catenin-like repeat | 530 | 569 | IPR000225 | GO:0005515 | |
| Arst6g00243 | 1005 | SUPERFAMILY | RING/U-box | 251 | 331 | - | - |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Arst6g00243 | - | - | gmx:100799969 | 1461.43 |
Showing 1 to 1 of 1 entries