Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00211 ATGTCGATTGCTGAGGCTGCTTGCAGTTACGCCGTTATGATCCTTCACGACGACAAACTCCCTGTCACTGCTGAAAATATCTCATCCTTGTTGAAAAGTGCCAAGGTATCAGTTGAGTCATACTGGCCCAGCTTATTTGCTAAACTCGCTGAGAAGAGAAATGTTGAGGATTTGATAGCCAGCGGTGGAGGAGGTGGGGCTCCAGTTGCTGTTGCAGCCGCCCCTGCTGCCGCTGCCGGTGGTGGTGGTGGTGCAGCAGCAGCTCCTGCAGCTGAGGAGAAGAAGAAGGAAGAACCCCAAGAAGAGAGTGATGATGATATGGGATTCAGCTTATTCGACTAG 342 0.5146 MSIAEAACSYAVMILHDDKLPVTAENISSLLKSAKVSVESYWPSLFAKLAEKRNVEDLIASGGGGGAPVAVAAAPAAAAGGGGGAAAAPAAEEKKKEEPQEESDDDMGFSLFD 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00211 113 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 113 - -
Arst6g00211 113 FunFam 60S acidic ribosomal protein P1 1 63 - -
Arst6g00211 113 CDD Ribosomal_P1 5 112 - -
Arst6g00211 113 Gene3D - 1 63 IPR038716 -
Arst6g00211 113 Pfam 60s Acidic ribosomal protein 22 112 - -
Arst6g00211 113 Hamap 50S ribosomal protein L12 [rpl12]. 6 113 IPR027534 GO:0003735|GO:0005840|GO:0006414
Arst6g00211 113 MobiDBLite consensus disorder prediction 78 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00211 Arst-Chr6 1785217 1786479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00211 1 113 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 51.724 3.69e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00211 K02942 - ncol:116248277 123.635