Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00207 ATGCAAATGCAGGAGGAGCAGATCATGAAGCTGAAGGACGAGAATGCGCCACCGGGGGACGTGGTGGTTAGGTGGGAGAAGTTTCTCCCTCGGATGGCGCTCAGAGTGTTGCTTGTTGAAGCCGATGATTCTACACGCCAGATCATATCCGCCCTTCTCCGAAAATGCAGTTACAAAGTTGCTGCAGTTCCTGATGGCCTAAAGGCATGGGAGACATTGAAGAGCAAAGCACCTGAGATTGATCTTATATTAACAGAAGTGGAGTTGCCGTCAATATCTGGATTTTCACTTCTCACGTTGATAATGGAGCATGACATTTGCAAAACCATTCCCGTCATAATGATGTCTACTAATGATTCAATTAGCATGGTATTCAAATGCATGCTGAAAGGTGCGGCTGATTTTCTTATAAAACCCATTCGAAGGAATGAGCTACGGAACTTATGGCAGCACGTATGGAGAAGGCATGCTATTAGCGGGTCCCATCAGAGTTTAACACTGCCGCAGAATAAATTTGAAGTTGCTGCAGAAAACAATGCTACGAGCAATAATTCTAGTGGTTCTGTGGCTTCCCCACAGAAAAATAGAGAGTACAGTGGTGAGAAAGCAAGTGATGCTCAAGTTACGTCCCCGTTGAAAAGTTTCTCAAAGTTGATCAATATTGACACAGTGAAGCATGAAGAGGCTACCAAATTTGAAAGGGAATCAGCTACGCACTATAGTGAATCCGGTGAGAAATCAAATATGTTTGTATCCGATGCTACAAGGTGCTACAAAACTCTTAATGCGACAGGTGTAAGGCTAGATCAAGGCTTTGATTGTGATGAAACAGAAAATGAAGATGAAGTTTTAAGAACAGAATTAAGCAAAGCCCATTCTCATATTAATACCGAGATTAACAAATGCAATGATACACTGGTAGAACCTTCTACAGGGGCAATTGACTTGATTGCTACATTTGAGAATTCTCCAAAGAGCACGGGTGAAAATTGTAGTTTCAATGCTGACAACACATTCAAGTCAGTTTTTGATACACAATTGGGACTTTCTTTAAGAAGAGATTCTCCTAGTAGCTCATGTAAGCTTGCACCGGAAGAAAGGAAAATATTGAACCATTCAACTGCATCGGCCTTTTCTTGGTATAGCAGCAGTAAGTTGTTGCAGCCCCTTTTCCCATCTCAATCAATTACTTCTGCTAAACTATCAAGTGTCAGTTGTAATTCTCATGAATCCCATAAGTCATCTGAAAATACACATACTCATCATCAGCATGGTGATAAAATTCAAGATAAACAGAACATGACCACTTTGGTCACTCAGACTGGCCAAATTGAACCAAAATCACCAAACGATGAACTTGGATTCTCTTGTGCTACTGGTGTTTCTTCTGATCATAACTCTATGGGGAATGCCAATGCTTTCCCTCGTATGCCCTGTGCACAATCAGCTGTGCATCCCATATGGACTCCGAAACCAGTGTCCAAGAAAGAAAATTCTTCATTTCCCACTAGTGCTTCTTCTCATTCCAACCCTGAAACTGACAATTCAGAATGTCATCGATGCTCGGATGATGCCACCTACACTTCTGATCAAAATGGAAATGATCAAAGCAAGATGGATTGTGTTAGGCATGACTCTGCTGCTGCTGCTGGTCAGAGTGCAAGTACTAGTTTTTACCTTGAAAATCATAATAGCAGCGGTGCATATGGAAGCATAGGCAGCGGAAGTGATGCAAATGCTACTTCAGCTGTGGTAACTAAGAACAACCCCTTTGCTGATAGTAGTCAACATAGTCATGATGGATTCAGAGGGACAGATTCTCATCGGAGCAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGGCTGAAGAGGAAGGAGAGATGCTACGAGAAGAAGGTTCGATATCAGAGCCGGAAAAGACTGGCAGAGCAGCGCCCTAGGGTGAAAGGGCAGTTCGTTCGCCAGGTGCAAAATGATCATCCAGTAGCAGGTGTAGGTGGCTCCTGA 2007 0.4295 MQMQEEQIMKLKDENAPPGDVVVRWEKFLPRMALRVLLVEADDSTRQIISALLRKCSYKVAAVPDGLKAWETLKSKAPEIDLILTEVELPSISGFSLLTLIMEHDICKTIPVIMMSTNDSISMVFKCMLKGAADFLIKPIRRNELRNLWQHVWRRHAISGSHQSLTLPQNKFEVAAENNATSNNSSGSVASPQKNREYSGEKASDAQVTSPLKSFSKLINIDTVKHEEATKFERESATHYSESGEKSNMFVSDATRCYKTLNATGVRLDQGFDCDETENEDEVLRTELSKAHSHINTEINKCNDTLVEPSTGAIDLIATFENSPKSTGENCSFNADNTFKSVFDTQLGLSLRRDSPSSSCKLAPEERKILNHSTASAFSWYSSSKLLQPLFPSQSITSAKLSSVSCNSHESHKSSENTHTHHQHGDKIQDKQNMTTLVTQTGQIEPKSPNDELGFSCATGVSSDHNSMGNANAFPRMPCAQSAVHPIWTPKPVSKKENSSFPTSASSHSNPETDNSECHRCSDDATYTSDQNGNDQSKMDCVRHDSAAAAGQSASTSFYLENHNSSGAYGSIGSGSDANATSAVVTKNNPFADSSQHSHDGFRGTDSHRSSQREAALTKFRLKRKERCYEKKVRYQSRKRLAEQRPRVKGQFVRQVQNDHPVAGVGGS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00207 668 SMART REC_2 34 149 IPR001789 GO:0000160
Arst6g00207 668 Pfam CCT motif 613 655 IPR010402 GO:0005515
Arst6g00207 668 MobiDBLite consensus disorder prediction 179 206 - -
Arst6g00207 668 ProSiteProfiles CCT domain profile. 613 655 IPR010402 GO:0005515
Arst6g00207 668 PANTHER TWO-COMPONENT RESPONSE REGULATOR 34 394 IPR045279 GO:0009736
Arst6g00207 668 MobiDBLite consensus disorder prediction 590 615 - -
Arst6g00207 668 MobiDBLite consensus disorder prediction 412 429 - -
Arst6g00207 668 MobiDBLite consensus disorder prediction 599 615 - -
Arst6g00207 668 MobiDBLite consensus disorder prediction 490 518 - -
Arst6g00207 668 ProSiteProfiles Response regulatory domain profile. 35 153 IPR001789 GO:0000160
Arst6g00207 668 MobiDBLite consensus disorder prediction 407 432 - -
Arst6g00207 668 SUPERFAMILY CheY-like 34 163 IPR011006 -
Arst6g00207 668 CDD psREC_PRR 36 139 - -
Arst6g00207 668 MobiDBLite consensus disorder prediction 493 512 - -
Arst6g00207 668 Gene3D - 32 263 - -
Arst6g00207 668 Pfam Response regulator receiver domain 36 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00207 Arst-Chr6 1758940 1763733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00207 608 657 Response Regulator Gene Family AT5G24470 84.000 8.63e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Arst6g00207 Response_reg 2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00207 K12130 - gmx:100779346 810.446