Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00206 ATGCAAATGCAGGAGGAGCAGATCATGAAGCTGAAGGACGAGAATGCGCCACCGGGGGACGTGGTGGTTAGGTGGGAGAAGTTTCTCCCTCGGATGGCGCTCAGAGTGTTGCTTGTTGAAGCCGATGATTCTACACGCCAGATCATATCCGCCCTTCTCCGAAAATGCAGTTACAAAGTTGCTGCAGTTCCTGATGGCCTAAAGGCATGGGAGACATTGAAGAGCAAAGCACCTGAGATTGATCTTATATTAACAGAAGTGGAGTTGCCGTCAATATCTGGATTTTCACTTCTCACGTTGATAATGGAGCATGACATTTGCAAAACCATTCCCGTCATAATGATGTCTACTAATGATTCAATTAGCATGGTATTCAAATGCATGCTGAAAGGTGCGGCTGATTTTCTTATAAAACCCATTCGAAGGAATGAGCTACGGAACTTATGGCAGCACGTATGGAGAAGGCATGCTATTAGCGGGTCCCATCAGAGTTTAACACTGCCGCAGAATAAATTTGAAGTTGCTGCAGAAAACAATGCTACGAGCAATAATTCTAGTGGTTCTGTGGCTTCCCCACAGAAAAATAGAGAGTACAGTGGTGAGAAAGCAAGTGATGCTCAAGTTACGTCCCCGTTGAAAAGTTTCTCAAAGTTGATCAATATTGACACAGTGAAGCATGAAGAGGCTACCAAATTTGAAAGGGAATCAGCTACGCACTATAGTGAATCCGAGAAATCAAATATGTTTGTATCCGATGCTACAAGGTGCTACAAAACTCTTAATGCGACAGGTGTAAGGCTAGATCAAGGCTTTGATTGTGATGAAACAGAAAATGAAGATGAAGTTTTAAGAACAGAATTAAGCAAAGCCCATTCTCATATTAATACCGAGATTAACAAATGCAATGATACACTGGTAGAACCTTCTACAGGGGCAATTGACTTGATTGCTACATTTGAGAATTCTCCAAAGAGCACGGGTGAAAATTGTAGTTTCAATGCTGACAACACATTCAAGTCAGTTTTTGATACACAATTGGGACTTTCTTTAAGAAGAGATTCTCCTAGTAGCTCATGTAAGCTTGCACCGGAAGAAAGGAAAATATTGAACCATTCAACTGCATCGGCCTTTTCTTGGTATAGCAGCAGTAAGTTGTTGCAGCCCCTTTTCCCATCTCAATCAATTACTTCTGCTAAACTATCAAGTGTCAGTTGTAATTCTCATGAATCCCATAAGTCATCTGAAAATACACATACTCATCATCAGCATGGTGATAAAATTCAAGATAAACAGAACATGACCACTTTGGTCACTCAGACTGGCCAAATTGAACCAAAATCACCAAACGATGAACTTGGATTCTCTTGTGCTACTGGTGTTTCTTCTGATCATAACTCTATGGGGAATGCCAATGCTTTCCCTCGTATGCCCTGTGCACAATCAGCTGTGCATCCCATATGGACTCCGAAACCAGTGTCCAAGAAAGAAAATTCTTCATTTCCCACTAGTGCTTCTTCTCATTCCAACCCTGAAACTGACAATTCAGAATGTCATCGATGCTCGGATGATGCCACCTACACTTCTGATCAAAATGGAAATGATCAAAGCAAGATGGATTGTGTTAGGCATGACTCTGCTGCTGCTGCTGGTCAGAGTGCAAGTACTAGTTTTTACCTTGAAAATCATAATAGCAGCGGTGCATATGGAAGCATAGGCAGCGGAAGTGATGCAAATGCTACTTCAGCTGTGGTAACTAAGAACAACCCCTTTGCTGATAGTAGTCAACATAGTCATGATGGATTCAGAGGGACAGATTCTCATCGGAGCAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGGCTGAAGAGGAAGGAGAGATGCTACGAGAAGAAGGTTCGATATCAGAGCCGGAAAAGACTGGCAGAGCAGCGCCCTAGGGTGAAAGGGCAGTTCGTTCGCCAGGTGCAAAATGATCATCCAGTAGCAGGTGTAGGTGGCTCCTGA 2004 0.4291 MQMQEEQIMKLKDENAPPGDVVVRWEKFLPRMALRVLLVEADDSTRQIISALLRKCSYKVAAVPDGLKAWETLKSKAPEIDLILTEVELPSISGFSLLTLIMEHDICKTIPVIMMSTNDSISMVFKCMLKGAADFLIKPIRRNELRNLWQHVWRRHAISGSHQSLTLPQNKFEVAAENNATSNNSSGSVASPQKNREYSGEKASDAQVTSPLKSFSKLINIDTVKHEEATKFERESATHYSESEKSNMFVSDATRCYKTLNATGVRLDQGFDCDETENEDEVLRTELSKAHSHINTEINKCNDTLVEPSTGAIDLIATFENSPKSTGENCSFNADNTFKSVFDTQLGLSLRRDSPSSSCKLAPEERKILNHSTASAFSWYSSSKLLQPLFPSQSITSAKLSSVSCNSHESHKSSENTHTHHQHGDKIQDKQNMTTLVTQTGQIEPKSPNDELGFSCATGVSSDHNSMGNANAFPRMPCAQSAVHPIWTPKPVSKKENSSFPTSASSHSNPETDNSECHRCSDDATYTSDQNGNDQSKMDCVRHDSAAAAGQSASTSFYLENHNSSGAYGSIGSGSDANATSAVVTKNNPFADSSQHSHDGFRGTDSHRSSQREAALTKFRLKRKERCYEKKVRYQSRKRLAEQRPRVKGQFVRQVQNDHPVAGVGGS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00206 667 SMART REC_2 34 149 IPR001789 GO:0000160
Arst6g00206 667 MobiDBLite consensus disorder prediction 492 511 - -
Arst6g00206 667 MobiDBLite consensus disorder prediction 598 613 - -
Arst6g00206 667 MobiDBLite consensus disorder prediction 179 206 - -
Arst6g00206 667 MobiDBLite consensus disorder prediction 589 613 - -
Arst6g00206 667 Pfam CCT motif 612 654 IPR010402 GO:0005515
Arst6g00206 667 Gene3D - 32 259 - -
Arst6g00206 667 PANTHER TWO-COMPONENT RESPONSE REGULATOR 34 391 IPR045279 GO:0009736
Arst6g00206 667 ProSiteProfiles Response regulatory domain profile. 35 153 IPR001789 GO:0000160
Arst6g00206 667 MobiDBLite consensus disorder prediction 406 431 - -
Arst6g00206 667 MobiDBLite consensus disorder prediction 489 517 - -
Arst6g00206 667 SUPERFAMILY CheY-like 34 163 IPR011006 -
Arst6g00206 667 CDD psREC_PRR 36 139 - -
Arst6g00206 667 ProSiteProfiles CCT domain profile. 612 654 IPR010402 GO:0005515
Arst6g00206 667 MobiDBLite consensus disorder prediction 411 428 - -
Arst6g00206 667 Pfam Response regulator receiver domain 36 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00206 Arst-Chr6 1758940 1763733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00206 607 656 Response Regulator Gene Family AT5G24470 84.000 8.76e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Arst6g00206 Response_reg 2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00206 K12130 - gmx:100779346 807.364