Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00197 ATGGATGCATACTCCTCTGGAGAAGAAGTGGTTGTTAAGACAAGAAAACCATATACAATTACGAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATCGGTTCCTAGAAGCCCTAAAGCTATATGGGCGAGCATGGCAGCGGATAGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTTCAAAGTTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCGTTAGGACAGGCTATTGATATAGACATCCCACCACCAAGGCCCAAAAGAAAACCAAGCAATCCTTATCCCCGTAAGACCAATGTTGGCACCCCAACCTCACATAGTGGAGCAAAATATGGAAAGCTTTTCATTTCAGTTGCATCTTCACATTGTAAACAAACACTGGACTTGGAGAAAGAACCTCTACCAGAGAAGCATAATGAAGATGAAAGGCCAACTTATGCAAACGAGAATAAGAGTGAAGGCTGCTCAAAAGTGTTTGCTGTTCTTGAGGAGGCACCCAGTTTGTCCCCATCTTCAGCAGACAAGAATTTAATACCAATGCAAAATTCATGTGCCTTGAGGGAGTATATACCTTTAGTGAAAGATGTAATAGTTGAAGATGAAGGAAATCAATCTTTTGTTACTGTTGAACATGAAAATCAGAAGTTGGGGATAGATGATGGTAAGTGCACGCAAACCAATGGCATTTGTAAAGCCTCTAAGATGGACATTTATTGTGCTTCTAAAGCCAAAATGGTTCATACTGAGAAAGCAGATGGAATTCAAGGCAGTCAGAATTACCCAAGGCATGTTACTGTGCATGTCATTGATGGGAATCATGGAACTGCTACACAAAATCCATCCCATGATACATTGTTTCGAGACTCCGTAATTCCGCAAGGAGGGGTTAATGGGCAACCAAATCATTTTACCAATCCAGCTGCATCAAACACAAGTGAAAGTCAAAATGACACAGCACGATCCTCTATTCATCAAACATTCCCCCCATGTCCTCCTTTCATGCAGCATAATCAAGAAGATTACCAATCATTTCTTCACATGTCATCCACATTTTCAAGTCTTATTGTTTCCACATTGATGCAAAACCCTGCCGCCCATGCTGCAGCAAGTTTTGCTGCAATGATTTGGCCCTGTGCAAGTGCAGAGACACCAGCAAATTCTCATTCGTGCTCTCAAGGAAGCTTTCCATCTAGCCATATTGGTTCTCCTCCAAGTGTGGCGGCTATAGCAGCTGCGACTGTAGCTGCTGCAACTGCGTGGTGGGCTGCCCATGGGCTGCTTCCTTTGTGTGCCCCACTTCATACTGCCTTTGCCTGTCCACCTTCATCAGCAACTGCAGCTCCCTTGATCAATACTGGCGAGGCATCACCCAAGACAGAGCAAGGAAACGTTGCTCCAGAAAATCCTCTGCAAGATCAGACAGCTGATCCAGAATATTCAGAAGCTCTTCATGCTCAAGATTCATCTTCTAAGTCACCAGCTGTTTCTTCATCCGAATATGAAGAGATTGGAGATGCCCAATTAAACGCTTCAACCAAGGCTACTACTGATCATGGGAAGAACCAAGAAGTTTCTGAACACCTTGACCCTGACAAAGTGAATGGCAGCAAACAAGTTGACCGCTCCTCATGTGGTTCCAACTCAGCCTCTAGCAGTGAAGAAACAGATGCACTAGAGAAGGAAGAAAAAGAAAAGGAAGAGTCCAAAACACATGATGCAAACCATGTAGATACTGAGCCAATTAATCGTCGTTGTAGAAGCATTAGCTACCTTACGGATTCTTGGAAGGAGGTCTCCGAAGAGGGACGGCTGGCCTTCCAGGCTCTATTCTCCAGAGAAGTGTTACCTCAAAGTTTTTCACCTCCGCATGATTTGATAAACAAGGATCATCAGATGGGCAATATCAAACATGACAATCAGCAGGTTGAGTGCAAAGATGAAGAGGATCTTGACAGTAAGAAATGCAGTTCTCAGTGTGAAGGGGTGCAAAAAAACCTGCAATTTGAAGAAAATAAGAAAGAAGAGGAGGGACTGCTGGCCATAGGTCTTGGACAAGGTAAGCTCAAGACTCGTCGAACAGGGTTTAAACCTTACAAAAGATGTTCAGTAGATGCCAAGGAAACCAGGATTGGAATGGCCTGTAACCATGGTGAAGAGAAGGGTCCCAAGAGAATACGCCTGGAAGGGGAGGCTTCAACATGA 2232 0.4413 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPLGQAIDIDIPPPRPKRKPSNPYPRKTNVGTPTSHSGAKYGKLFISVASSHCKQTLDLEKEPLPEKHNEDERPTYANENKSEGCSKVFAVLEEAPSLSPSSADKNLIPMQNSCALREYIPLVKDVIVEDEGNQSFVTVEHENQKLGIDDGKCTQTNGICKASKMDIYCASKAKMVHTEKADGIQGSQNYPRHVTVHVIDGNHGTATQNPSHDTLFRDSVIPQGGVNGQPNHFTNPAASNTSESQNDTARSSIHQTFPPCPPFMQHNQEDYQSFLHMSSTFSSLIVSTLMQNPAAHAAASFAAMIWPCASAETPANSHSCSQGSFPSSHIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPSSATAAPLINTGEASPKTEQGNVAPENPLQDQTADPEYSEALHAQDSSSKSPAVSSSEYEEIGDAQLNASTKATTDHGKNQEVSEHLDPDKVNGSKQVDRSSCGSNSASSSEETDALEKEEKEKEESKTHDANHVDTEPINRRCRSISYLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLINKDHQMGNIKHDNQQVECKDEEDLDSKKCSSQCEGVQKNLQFEENKKEEEGLLAIGLGQGKLKTRRTGFKPYKRCSVDAKETRIGMACNHGEEKGPKRIRLEGEAST 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00197 743 MobiDBLite consensus disorder prediction 523 593 - -
Arst6g00197 743 MobiDBLite consensus disorder prediction 529 546 - -
Arst6g00197 743 MobiDBLite consensus disorder prediction 305 335 - -
Arst6g00197 743 MobiDBLite consensus disorder prediction 459 485 - -
Arst6g00197 743 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Arst6g00197 743 SMART sant 23 71 IPR001005 -
Arst6g00197 743 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Arst6g00197 743 MobiDBLite consensus disorder prediction 547 563 - -
Arst6g00197 743 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Arst6g00197 743 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Arst6g00197 743 MobiDBLite consensus disorder prediction 459 511 - -
Arst6g00197 743 MobiDBLite consensus disorder prediction 493 511 - -
Arst6g00197 743 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Arst6g00197 743 CDD SANT 26 69 IPR001005 -
Arst6g00197 743 MobiDBLite consensus disorder prediction 564 592 - -
Arst6g00197 743 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Arst6g00197 743 MobiDBLite consensus disorder prediction 139 158 - -
Arst6g00197 743 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Arst6g00197 743 PANTHER SWI/SNF COMPLEX-RELATED 7 624 - -
Arst6g00197 743 Gene3D - 26 73 - -
Arst6g00197 743 MobiDBLite consensus disorder prediction 139 160 - -
Arst6g00197 743 MobiDBLite consensus disorder prediction 86 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00197 Arst-Chr6 1727488 1735359 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst6g00197 Myb_DNA-binding 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00197 K12133 - gmx:780540 955.666