Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00196 ATGGATTTCGGAGGAGGAGGAGGGACCCGGGTGATCGGAGATTACATACTTGGACCTAAAATCGGGTCGGGTTCCTTCGCGGTAGTGTGGCGTTCAAGGCACCGCAAATCCGGCACGGTGGTGGCTGTTAAGGAGATCGATAAGAAGCAGCTGAGCCCCAAAGTGAGTGAGAATCTGTTTAAAGAGATTACTATTCTCAGCACAATCGATCATCCCAACATCATTCGACTCTTCGAAGCTATTCAGACCAAGGACAGGATTTACCTTGTGTTGGAGTATTGTAGTGGTGGCGACCTTGCAGCTTACATTCATCGCCATGGCAAAGTTTCTGAAGCCACTGCCAGGCACTTCATGATCCAATTGGCTGCGGGGTTGCAGGTTCTTCAAGAGAAGAACCTCATTCACAGAGATTTGAAACCACAGAACTTACTATTGGCAACTTCTGGAGCTACACCACTCATGAAAATAGGAGATTTTGGTTTTGCAAGGTCTCTCACACCCCAGGGTTTGGCTGACACTTTGTGTGGTTCACCATTATACATGGCTCCAGAGATAATTCAAAATAAAAAATATGATGCCAAGGCTGATTTATGGAGTGTAGGGGCAATATTGTTCCAACTAGTAACTGGGAAGCCACCATTTGATGGAAATAGTCAACTGCAGCTTTTTCAAAATATTTTGACATCTACCGAGCCGCAGTTTCCCCAAGAGGCTTTAAAAGAGCTACATTCTGATTGCTTGGATCTTTGCAAAGGCCTTTTACGTCGAAACCCAGTTGAGCGATTAACTTTCAAGGAGTTCTTCAATCACAATTTCCTTCAGGAACCCAGGTTAATCATGCATGTTGAGCAGTCTTTATTGCATCCATCAGAGAGATCCGTGGTTCAACACTTAGTTACCTCCACTTCGGACATGTCTCAGTTGCATTCTGGGCATCATGTTGAGTCATTAGTAGATGATCCAGTTGTAGTCAATTCAGTTCTCAATGATACTTTGGCACTGCAAAGAAATACTGGGAAGAAAACAATTGGCATTCAGGCTGTTGAGACACCTGTTTTTGGTTGTTCTCATTTGTCAAAAGAACCTCAAGTTTCTCGTTTAATGGAGTCCATTGAAAAAGATTATGTCCTAGTCAATCATCATTTTGCATCATTGGAAGCTTTCTCTGAGTACTTTGAGGCATCTGTGCAAGATAATTCCACTTGCAAGGTTTCTATTTGCTCTTCAAAGAGGACTAACATGGAAACTGGTGTTCCAATGCAAACAAATGATCCATCCCATTGCCATGCTGGTGAATTAGAAGATCCGAAAAGTGGCGAACCTGTGGCATTAGCGGCATCCCGTGCATTTGATGTCTTAAGTAAAATGCATGGAACTTCCTCGCTGAGCTCTTCAAACAGGCTAGAGTTATTGCATCTGTATGTGCAGATCCTTGCGGAGCTTTCATGTGAAAAGTACAATGCAAAATTGTATCTGGAATCGTTTGCAGTTGAGTTGGTAGTTTTGGCTATATGGAAGAAAGCTCTAGAAGTTTGTGAATCTTGGATGAATAAGGGTGTGTTGCCTGCAAGCACTTTGGCCAATGAAGCCAGAACTTCCTATGGAGATGTGGGTTCATCACAGAACATGGAAAAGAAAATAAATTTCTGTGATCCTTTGTCAGTCTACATGTGGGCAAAAGAGGGGTTTATTGCTGCAGTTGATAGTGCTCAGACACTGTCACGTCATATTCAAAATATGGATGGAGAAGCTGAGATGCCAGATGCAATGGAGATCATATTCCAAGAAGCACTCCTAGTTGGTAAAAGTGGTGCTGTAGATGAATATATGGAGAACAGAGGTAGGGCAGCTGCATCTTATTCAAAAGCTATGCTTCTGCTTTCCTTTATTGTGGGGGAAGCAACGAACCTTCCATTAAACCCGCCATTTTTGCTTACTGCTGCTAACGAGAAGCGAATCCTACAATATATTCACAACTTGCAATCCCATCAAAAATCTTCATCAGAGTCTTCTCCCAAAGCAACCCATGTTCTTTTGTCTGAGTAA 2046 0.4286 MDFGGGGGTRVIGDYILGPKIGSGSFAVVWRSRHRKSGTVVAVKEIDKKQLSPKVSENLFKEITILSTIDHPNIIRLFEAIQTKDRIYLVLEYCSGGDLAAYIHRHGKVSEATARHFMIQLAAGLQVLQEKNLIHRDLKPQNLLLATSGATPLMKIGDFGFARSLTPQGLADTLCGSPLYMAPEIIQNKKYDAKADLWSVGAILFQLVTGKPPFDGNSQLQLFQNILTSTEPQFPQEALKELHSDCLDLCKGLLRRNPVERLTFKEFFNHNFLQEPRLIMHVEQSLLHPSERSVVQHLVTSTSDMSQLHSGHHVESLVDDPVVVNSVLNDTLALQRNTGKKTIGIQAVETPVFGCSHLSKEPQVSRLMESIEKDYVLVNHHFASLEAFSEYFEASVQDNSTCKVSICSSKRTNMETGVPMQTNDPSHCHAGELEDPKSGEPVALAASRAFDVLSKMHGTSSLSSSNRLELLHLYVQILAELSCEKYNAKLYLESFAVELVVLAIWKKALEVCESWMNKGVLPASTLANEARTSYGDVGSSQNMEKKINFCDPLSVYMWAKEGFIAAVDSAQTLSRHIQNMDGEAEMPDAMEIIFQEALLVGKSGAVDEYMENRGRAAASYSKAMLLLSFIVGEATNLPLNPPFLLTAANEKRILQYIHNLQSHQKSSSESSPKATHVLLSE 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00196 681 CDD STKc_ATG1_ULK_like 21 272 - -
Arst6g00196 681 FunFam Non-specific serine/threonine protein kinase 7 95 - -
Arst6g00196 681 Pfam Protein kinase domain 18 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00196 681 Gene3D Transferase(Phosphotransferase) domain 1 8 346 - -
Arst6g00196 681 SUPERFAMILY Protein kinase-like (PK-like) 11 315 IPR011009 -
Arst6g00196 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Arst6g00196 681 ProSiteProfiles Protein kinase domain profile. 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00196 681 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 8 549 IPR045269 GO:0004674|GO:0006914
Arst6g00196 681 SMART serkin_6 15 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00196 681 FunFam Serine/threonine-protein kinase ATG1 7 315 - -
Arst6g00196 681 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00196 Arst-Chr6 1722775 1727121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00196 5 279 CBL-interacting serine-threonine protein kinases AT2G30360 36.620 7.30e-53 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Arst6g00196 Pkinase 2.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00196 - K08269 gmx:100782508 866.3