Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00190 ATGGAAGAAGAAGTGAAAGGATATTCCGATAGCAGAGAAGAGGAGGAGGAGGAGGAGGAAGACGAAGCAGCGGAAATCATCCCAATTCCAAACACAAGACAAGAAACCAACAGCAGCGGAAACAGGTTACAGCAGCAGCAAGATACAGCAGTAGCTCCCAATTTCAGTCAGCGGAAGCAGCTAGATTTGATGGAGTTGTCACTAGGGAGCGGGAGCAGCAAGGACGATCGGAATTGGCAGCAAGGAGGAGGAGGAGGAGGAGGAATGGTTGGTTCTTGCTCATCATCATCATCGGAGGCGGTGGAGAAAGAGCACATGTTCGACAAAGTGGTGACCCCAAGCGACGTAGGGAAGCTGAACAGGCTAGTGATACCGAAGCAGCACGCGGAGAAGTACTTTCCATTGGACTCATCCTCCAACGATAAGGGGCTTCTCCTCAACTTCGAGGACAGGAACGGCAAGCTGTGGCGCTTCAGATACTCCTACTGGAACAGCAGCCAGAGCTATGTTATGACCAAAGGCTGGAGTCGCTTCGTTAAGGAGAAGAAGCTCGACGCCGGCGACATTGTCTCCTTCCACCGCGGCCTCGGGGAACTCTATAGACACAGGCTGTACATTGACTGGAGGCGCAGGCCCGACCATCCCCCTCCTGACCCTTCCGCCTCCCTCATCTCCCCTTTCTTCCTTCCTAACCACTACTCCGCCGCCATCACATGGGGCGCCGGCGGCAGGTTCTACTCTCTGCCTTCTCCCACGCCTCCTCCTCGCCACCATCACTTTCATCATCATCAGCACCACCCCCTCGCTACTAATTACAACACCCATATGTATGGCTTTCATCATCATCCAGGTGCTGCAGCAACTGGAACAAGTCATCATCTTCTCAGCGGTTACAACGATCAGCAGCTGAATTCCGGATCTCCTGGACCTCTCTATTACCTGAGGTCACCCCCCTCAATGTCAATTGTTGACCCCAACTTGCATCAGGAGAGAGGGACTGCTATTGCCCCCATGATCATTGATTCTGTGCCGGTTGCTCATCATCATCATCAACAACAGCAACATCAACATGGTGTGGTGCCTAATAGTAGTAACTTTGACAGTACTAATACCGCAGGAAAACGGCTGAGGCTATTTGGGGTCAACATGGAATGTGCTTCTTCTTCTTCTTCTTCCCCAGCTGAAGATCACTCGCATTTGGCAATGTCTAGTTCATTACCATCGTCAAGCAGGTTTGGGGATCAGAGAGGGGATACTACTACTACTACTACTTCTGTACTTTTTGATTTGGATCCCTCTTTGCAATACCATCACCACCACCGGCATTGA 1329 0.5139 MEEEVKGYSDSREEEEEEEEDEAAEIIPIPNTRQETNSSGNRLQQQQDTAVAPNFSQRKQLDLMELSLGSGSSKDDRNWQQGGGGGGGMVGSCSSSSSEAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRGLGELYRHRLYIDWRRRPDHPPPDPSASLISPFFLPNHYSAAITWGAGGRFYSLPSPTPPPRHHHFHHHQHHPLATNYNTHMYGFHHHPGAAATGTSHHLLSGYNDQQLNSGSPGPLYYLRSPPSMSIVDPNLHQERGTAIAPMIIDSVPVAHHHHQQQQHQHGVVPNSSNFDSTNTAGKRLRLFGVNMECASSSSSSPAEDHSHLAMSSSLPSSSRFGDQRGDTTTTTTSVLFDLDPSLQYHHHHRH 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00190 442 MobiDBLite consensus disorder prediction 355 369 - -
Arst6g00190 442 MobiDBLite consensus disorder prediction 9 25 - -
Arst6g00190 442 Pfam B3 DNA binding domain 107 211 IPR003340 GO:0003677
Arst6g00190 442 MobiDBLite consensus disorder prediction 346 369 - -
Arst6g00190 442 MobiDBLite consensus disorder prediction 30 79 - -
Arst6g00190 442 FunFam B3 domain-containing protein 100 220 - -
Arst6g00190 442 CDD B3_DNA 105 194 IPR003340 GO:0003677
Arst6g00190 442 SMART B3_2 107 212 IPR003340 GO:0003677
Arst6g00190 442 MobiDBLite consensus disorder prediction 1 95 - -
Arst6g00190 442 SUPERFAMILY DNA-binding pseudobarrel domain 104 212 IPR015300 -
Arst6g00190 442 MobiDBLite consensus disorder prediction 386 420 - -
Arst6g00190 442 ProSiteProfiles B3 DNA-binding domain profile. 107 212 IPR003340 GO:0003677
Arst6g00190 442 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 21 395 IPR044800 GO:0003700
Arst6g00190 442 Gene3D - 100 215 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00190 Arst-Chr6 1636056 1638377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00190 97 388 RAV Transcription Factor Family AT2G46870 48.173 9.92e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Arst6g00190 B3 4.9e-28 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00190 K09287 - gmx:100778733 366.311