Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00188 ATGGCAACTCGCTATCTCAGATTGGCCCTCCTATCTTTCGAGATAAGAGCCTCCCTCCATATTCCACATTGCATACACACTCCAATCATGGCTTCCGCTTATGCTTCCTCTGCCATTGCAGCTGTTGGCATCTCTAGTCCAAACACAAAAGCTTCATTCCTAAGTGGGAGGAAGTTGAAGAGGGCGGCTAAGAAGGCAACAGGCGTTAGAGGAGTATCGAGCACAAGAGTATGTGCAGCAGCGGCTGACCCTGAGAGACCCCTGTGGTTCCCAGGAAGCACGCCTCCTCCATGGCTTGATGGCAGCCTCCCTGGAGACTTTGGGTTTGATCCACTTGGTCTGGGGTCTGATCCTGAGAGCCTGAGATGGAATGTGCAGGCAGAGCTGGTGCACTGCAGGTGGGCAATGCTGGGTGCTGCGGGCATCTTCATTCCTGAATTCCTAACAAAGATTGGCGTGCTCAACACGCCATCGTGGTACACAGCTGGAGAACAGGAGTACTTCACGGACACAACCACGCTCTTCATAGTTGAGCTCATCTTCATTGGATGGGCAGAGGGAAGGAGGTGGGCTGACATCATCAAGCCAGGCTGTGTCAATACCGACCCCATTTTCCCAAACAACAAGCTCACTGGCACCGATGTTGGTTACCCCGGTGGCCTCTGGTTTGACCCTCTCGGATGGGGCACTGGCTCTCCTGAAAAGATCAAGGAATTGAGAACTAAGGAGATCAAGAATGGCAGGCTCGCCATGTTGGCTGTCATGGGTGCTTGGTTCCAGCACATCTACACCGGCACTGGTCCCATTGACAACCTCTTTGCCCACCTTGCTGATCCCGGCCATGCTACCATTTTTGCTGCTTTCACCCCCAAGTGA 876 0.5331 MATRYLRLALLSFEIRASLHIPHCIHTPIMASAYASSAIAAVGISSPNTKASFLSGRKLKRAAKKATGVRGVSSTRVCAAAADPERPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00188 291 SUPERFAMILY Chlorophyll a-b binding protein 79 289 - -
Arst6g00188 291 FunFam Chlorophyll a-b binding protein, chloroplastic 96 281 - -
Arst6g00188 291 Gene3D Chlorophyll a/b binding protein domain 96 281 - -
Arst6g00188 291 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 52 289 IPR001344 GO:0009765|GO:0016020
Arst6g00188 291 Pfam Chlorophyll A-B binding protein 95 261 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00188 Arst-Chr6 1624021 1625349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00188 77 291 Chloroplast and Mitochondria Gene Families AT3G61470 91.628 8.24e-150 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00188 K08908 - gmx:100784089 477.633