Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00156 ATGTGTGGAGGTGCTATTATCTCCGACTTCATTCCGGCGGCGGCGGCGGTGACAGCTAGGTCTCGCCGGCTCACCGCGGAGTACCTGTGGCCTGACCTGAAGAAAGGCAGCTCAGGGAAGCGCGTGCCGAAGGCAGCGGTAATCGACCTCGACGATGATTTCGAGGCCGATTTCAGGGAATTCAAGGACGACTCCGACATCGACATTGACGACGATGAGGATGATGCCAAGCCCTTTGCTTTCGCCGCCGCCAAAGCTCCCAAGTCCATATCCCCTGGAAAATCTGCGGTCAAAGCACAATCTGAGAAGTCTGCAAAGAGAAAGAGGAAGAATCAGTACAGGGGAATCCGTCAGCGTCCTTGGGGGAAATGGGCGGCTGAGATCCGTGATCCAAGAAAGGGTGTTCGTGTCTGGCTAGGAACCTTCAGCACTGCTGAAGAGGCTGCCAGAGCTTATGATGCTGAAGCACGGAGGATTCGTGGCAAGAAAGCCAAGGTGAATTTCCCTGAAGAGGCACCACGCACTCCTCCGAAACGTGCCAGGCCAAATCTGAATGCTGTTCAGCCCAATCTGAGTCATAAATTCAGTGTTGGTAACAATATGGAGAACTATGGTCCTCTGGATGGGTTTGAACAGAAACCACTGGTTAACCAGACTGCTAACATGGACTCCATTCCTGAGGGTGGAAATGGTTTTACATCCCTTACCTCACCTGATGATGTGACCCTTTACTTCAGCTCGGATCAGGGGAGTAATACATTTGATTATTCAGATCTTCGCTGGGGTGAACAGGCCCCAAAGACTCCCGAGATCTCATCCATGCTTTCTGCTGCTCTGGAAGGGGAATCTCCTTTTGAGCAAGATGCTAACCAACAGAAAAATCTGCAGTCTATCTCACAGGATGTGGTACCTATGAAAGATGATTCTTCAAAGACACTGTCTGAGGAGCTTGTGGATATTGAATCCGATTTGAAATTCTTTCAGATGCCTTTTCTTGAAGGGAGCTGGGATGATACTTCATTGGAATCTTTGCTAGCTGGAGACACCACTCAGAATGGTGAAAACCTGATGAACCTGTGGAGCTTTGATGACATTCCTTCCATGTCTGGTGGTGTGTTCTGA 1122 0.5 MCGGAIISDFIPAAAAVTARSRRLTAEYLWPDLKKGSSGKRVPKAAVIDLDDDFEADFREFKDDSDIDIDDDEDDAKPFAFAAAKAPKSISPGKSAVKAQSEKSAKRKRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFSTAEEAARAYDAEARRIRGKKAKVNFPEEAPRTPPKRARPNLNAVQPNLSHKFSVGNNMENYGPLDGFEQKPLVNQTANMDSIPEGGNGFTSLTSPDDVTLYFSSDQGSNTFDYSDLRWGEQAPKTPEISSMLSAALEGESPFEQDANQQKNLQSISQDVVPMKDDSSKTLSEELVDIESDLKFFQMPFLEGSWDDTSLESLLAGDTTQNGENLMNLWSFDDIPSMSGGVF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00156 373 Pfam AP2 domain 112 161 IPR001471 GO:0003700|GO:0006355
Arst6g00156 373 CDD AP2 112 170 IPR001471 GO:0003700|GO:0006355
Arst6g00156 373 SUPERFAMILY DNA-binding domain 112 170 IPR016177 GO:0003677
Arst6g00156 373 Gene3D AP2/ERF domain 111 170 IPR036955 GO:0003700|GO:0006355
Arst6g00156 373 PRINTS Ethylene responsive element binding protein signature 135 151 IPR001471 GO:0003700|GO:0006355
Arst6g00156 373 PRINTS Ethylene responsive element binding protein signature 113 124 IPR001471 GO:0003700|GO:0006355
Arst6g00156 373 ProSiteProfiles AP2/ERF domain profile. 112 169 IPR001471 GO:0003700|GO:0006355
Arst6g00156 373 SMART rav1_2 112 175 IPR001471 GO:0003700|GO:0006355
Arst6g00156 373 MobiDBLite consensus disorder prediction 90 116 - -
Arst6g00156 373 PANTHER DNA-BINDING DOMAIN 85 284 IPR044808 GO:0003700|GO:0009873
Arst6g00156 373 FunFam Ethylene-responsive transcription factor 2 111 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00156 Arst-Chr6 1443751 1446104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00156 1 373 AP2-EREBP Transcription Factor Family AT1G53910 44.878 9.12e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst6g00156 AP2 4.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00156 K09286 - gmx:100170723 416.772