Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00151 ATGGATTCGATAAACTCGTTCAAAGGGTATGGCAAAGTGGACGAGGCAGAGCAGCAAGCCTTCCAGAAGAAGACTCGCAAGCGCCTCATCATACTCATAGTCTCCTCCATAGTCCTCATCGCCGTCATCATCGCCGCCGTCTTAGGCACCGTCCTACACAGCCGCCGTTCTTCCTCTGGCCCCTCAACGGAGCTATCCCCGGTGTCCTCTCTGAGAGCCGTGTGCGAAGTCACCCAGTACCCAGAGTCGTGCATGTCGAGCATCTCCTCCCTCCCAGACTACTCCAACACCACCGACCCACACCTCCTCTTCAGCCTCTCTCTCCGCGTAGCCATTAACGAGCTCTCCAACCTCTCCCATTATCCTTTCAAGCTCCGCTCCTCCATCAAGGAACCCCGTCTCCAGAAAGCCATTGATGTCTGTGCTACGGTCCTCGCCGACGCTGTCGCCAATTTCAACGACTCCGTCTCCACCCTCGACGCCGCCGGCAAGCTACCATCTACCACCAAGATCAGTGACATTAAGACCTGGGTGAGCGCCGCCATCACCAACCAAGATACCTGCTTGGACGCCCTCGAGGAGGTTAATAACTCCACCGCCGCCAACGCCGCCCTCGAGGACATGAAAACCACCATGAAGAACTCCACGGAGTTCTCGAGCAACAGCCTGGCCATCGTGACGAGGATCCTGGGGCTGCTCTCCCAATTCAACAGCCCGATGAACAGGCGGCGGCTTCTGGGGTTCCCGGAGTGGGTGGGGGCGGCGGAGAGGAGGCTGCTGCTGGATAATGGGAACACCGCGACGGGAACGACGACGCCGGATGCGGTGGTGGCGAGCGATGGGAGTGCGCAGTACAAGACGATAAAGGAGGCGGTGCTTGCGGTGAAGAAGAAGAGCGAGAAGAGATTCGTGATATATGTGAAGGCAGGGACTTATGTTGAGAACATTGATTTGGATAAGGACACTTGGAATGTGATGATCTACGGTGATGGAAGTGACAAGACCATCATCTCCGGCAGCCGCAACTTCATCGACGGCACTCCCACTTTTGAGACTGCCACTTTCGCTGTGAAGGGAAAGGGTTTCATTGCGAAGGACATACGGTTCAAGAACACAGCAGGCGCAGACAAGCATCAGGCGGTGGCACTGCGATCAGGGGCGGACCAATCAGTGTTCTACAGGTGCTCCTTCGAGGGTTTCCAGGACACACTCTACGCCCATTCCAACAGGCAGTTCTACCGCGACTGCGACATCACCGGCACCATCGACTTCATCTTTGGCAACGCCGCAGTGGTCTTCCAGAACTGCAAGATCATGCCACGTCAGCCTCTCCCCAACCAGTTCAACACCATAACCGCTCAGGGAAAGAAAGACCCCAACCAGAACACCGGCATCGTCATCCAGAAATGCTCCTTCTCTGCCTTCGCCAATGATCTTCAGGCCCCTACCTACCTTGGCCGCCCTTGGAAGGATTTTTCCACCACCGTCATCATGCAGTCCGACATCGCCTCCTTCTTGAAGCCCGTGGGCTGGATAAGCTGGGTTGCCAATGTCGATCCACCAAAAACTATATTTTACGGTGAGTACCGCAACACTGGGCCTGGATCCGATGTCTCGCAACGGGTTAAGTGGGCTGGCTATAACCCCTCTCTAACTGAAACTGATGCTGCCAAGTTCACAGTGCAGTCCTTTATTCAGGGCCCGGATTGGTTGCCAAATTCTGCTGTAAACTTTGACTCCACTCTCTGA 1749 0.5563 MDSINSFKGYGKVDEAEQQAFQKKTRKRLIILIVSSIVLIAVIIAAVLGTVLHSRRSSSGPSTELSPVSSLRAVCEVTQYPESCMSSISSLPDYSNTTDPHLLFSLSLRVAINELSNLSHYPFKLRSSIKEPRLQKAIDVCATVLADAVANFNDSVSTLDAAGKLPSTTKISDIKTWVSAAITNQDTCLDALEEVNNSTAANAALEDMKTTMKNSTEFSSNSLAIVTRILGLLSQFNSPMNRRRLLGFPEWVGAAERRLLLDNGNTATGTTTPDAVVASDGSAQYKTIKEAVLAVKKKSEKRFVIYVKAGTYVENIDLDKDTWNVMIYGDGSDKTIISGSRNFIDGTPTFETATFAVKGKGFIAKDIRFKNTAGADKHQAVALRSGADQSVFYRCSFEGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCKIMPRQPLPNQFNTITAQGKKDPNQNTGIVIQKCSFSAFANDLQAPTYLGRPWKDFSTTVIMQSDIASFLKPVGWISWVANVDPPKTIFYGEYRNTGPGSDVSQRVKWAGYNPSLTETDAAKFTVQSFIQGPDWLPNSAVNFDSTL 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00151 582 Pfam Pectinesterase 274 567 IPR000070 GO:0030599|GO:0042545
Arst6g00151 582 SUPERFAMILY Pectin lyase-like 270 580 IPR011050 -
Arst6g00151 582 CDD PMEI-like_3 73 229 - -
Arst6g00151 582 Pfam Plant invertase/pectin methylesterase inhibitor 70 225 IPR006501 GO:0004857
Arst6g00151 582 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Arst6g00151 582 FunFam Pectinesterase 67 230 - -
Arst6g00151 582 FunFam Pectinesterase 268 582 - -
Arst6g00151 582 PANTHER PECTINESTERASE 38 572 - -
Arst6g00151 582 SMART PMEI_2 66 225 IPR006501 GO:0004857
Arst6g00151 582 Gene3D - 268 582 IPR012334 -
Arst6g00151 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 229 IPR035513 -
Arst6g00151 582 NCBIfam pectinesterase inhibitor domain 43 227 IPR006501 GO:0004857
Arst6g00151 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 71 230 IPR035513 -
Arst6g00151 582 ProSitePatterns Pectinesterase signature 1. 299 318 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00151 Arst-Chr6 1396283 1400026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00151 1 576 Carbohydrate Esterase AT1G53840 59.459 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00151 - - gmx:100777128 852.818