Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00137 ATGCTCCATTTTCATTGGGGTCAAACGAATACAACTTCAGCGAAATGTCTCATCAACAGCATTTCACGATTCATTCATCTAGTTTCTTGCCATACAGTAAAGCCTACCCCCCTTAAGAAGAACTTTGATAATATGGTTAGTGTGTTGAAGCGTTTGAAACCTGTGCTCGATGATGTTGTGGATCACAATCTCCCTTTGGAGGAAAATCTGTATAGAGAATGCGAGGAATTGGATATGTTGGTTAATGAAGCTAGAGAGCTCATTGAAAAATGGGGCCCAAAGATGAGCAAGATTCGCAGCGTTCTTCGAAGTGGTAAATTGCTGATCAAGTTACAGAGTGCTTCACTTTATATTTGTCGTGTGATTGTTAGATCCCTAAAGTCACCTTCAAATCCTTCAGTTTTGTCCAATCTTCAGCAATATATGCAGGACCTTCAGCATCTTAAGAAGGAGACAGCAGTGGTCTATATAGAAGAAGCACTTAGAAACCAAAGGAATAATGTTCAAACTTCAAATGATCGTCTAAAAGGAATTATTGAGTTACTTCACCTTACATCAAACCAGGAGCTTTTAAAAGAAAGTATTGCTGCGGAAAAGGAAAAGTTGAACACTGAAGTCAATAAAATGAAAGAGGAACTGGATGAAATTAACCAAATTGTGAATCTTGTCTGCAACTTACGCGAGTATGTGTTGAAATTTGAGTGCCGTGAAGTCAAACACGGTGTCTCTATCCCACAATATTTTAGATGTCCTTTATCATTGGAACTTATGTCAGAACCTGTTATTGTGGCTTCTGGTCAAACATACGAGAGGCAATCCATTCAAATTTGGCTTGATCATGGCCTGACTGTTTGTCCCAAGACTCATCAGAGACTTTCCCATACAAATCTTATTCCGAATTATACCGTGAAAGCTATGATAGCAAACTGGTGTGAGGAAAATGCTGTCAAACTTCCCAATAACTCTAAGCCTAAAAGTTCTTACCATGTTTCAACCCCGTCAGATCATTCATTTCCTGAAGATTTTGATCCTGTGTGTAGTTTTGGGTCTTCACATAGTAGCTATTCCACTTCAAAATCGTCCCCTCAAACTGGAAGTGCATTTGAGAAGCAAAATGGTGACGGTTCTTTCAGACTAAGTGGAGAATCAAATGGATGCAGAAGTGGAGAGACAGAAAAGTTTGAGCACTCATCCCCTGAGGCTTCATGTAGTCACAGCAGAAGTGAATCAGTGTCAAGTTCTATTTCTAGCAGTGATTATGTAAACCCAGTTTCAAAAGGGGTGTCAGCCATACCTAATAAGCATCAAAATGTGTTGTGCAGAGAAATCATAAATGAGCATCCTGCAAATAAAGAATCAGGGATTTCTACTCGGTTTTCAGGAAAGCAATCTCAAATCCCTGAATCCAAAATTGTAGTGATGGAGAACGGAAATAATCATAGAAAGAATAATAATATTATTAATAGCCACACGGAAGTTGATTCGGTTCCTGCTTCCAACTTACAGCATGATGAACTAACTACCATATCTCATGTCAACAAGTTGATTGAAGACCTTCAGAGTAAGTCAAATGAGGTGCAAACTGCTGCTGCAGAAGAATTGAGGCTCCTTACCAAGAATAACATGGAAAACCGTGTCATTGTTGGGAAGTGTGGTGCAGTTACACCATTACTTTCACTGCTGTATTCGAATGTGAAGATAACACAAGAACATGCTGTGACAGCTCTTCTGAATTTGTCAATTTACGAGGACAACAAGTCTTTGATTATGGAAGCAGGAGCCATAGAACCACTGATCCACGTTTTGAAGACAGGAAATGATGGTGCCAAGGAGAATTCTGCAGCAGCACTATTCAGCCTCTCCGTAATAGAAAACAATAAGGAAAAAATTGGCCGTTCCAGTGCAGTTAAAGCTTTGGTGGATCTTCTAGCCTCAGGAACACTAAGGGGAAAGAAGGATGCTGCCACTGCTTTATATAACTTATCAATATTTCACGACAATAAAGCTCGGATAGTTCAAGCTGGAGCTGTGAAGTATCTGACTCAGTTATTGGACCCAGCTGACAGAATGGTTGACAAGGCTGTTGCTCTTTTAGCAAATCTCTCAACAATTGCAGAGGGTCGAATAGAAATAACAAGGCAAGGGGGAATTCCCTTGCTAGTTGAAATTTTGGAATCAGGTTCTCAAAGGGGGAAGGAAAATGCTGCTTCTATTCTCTTCCAACTATGCCTTCATAGTTCGAAGTTTTGTACCCTCGTTCTGCAAGAAGGAGCTGTACCACCCCTTGTTGCATTGTCTCAGTCCGGCACGACAAGAGCAAAAGAAAAGGCGCAACAGCTACTCAGTCATTTCCGTAATCAGCGTGAAGTGGCTGCCGGGAAGGGAAGATCATGA 2394 0.406 MLHFHWGQTNTTSAKCLINSISRFIHLVSCHTVKPTPLKKNFDNMVSVLKRLKPVLDDVVDHNLPLEENLYRECEELDMLVNEARELIEKWGPKMSKIRSVLRSGKLLIKLQSASLYICRVIVRSLKSPSNPSVLSNLQQYMQDLQHLKKETAVVYIEEALRNQRNNVQTSNDRLKGIIELLHLTSNQELLKESIAAEKEKLNTEVNKMKEELDEINQIVNLVCNLREYVLKFECREVKHGVSIPQYFRCPLSLELMSEPVIVASGQTYERQSIQIWLDHGLTVCPKTHQRLSHTNLIPNYTVKAMIANWCEENAVKLPNNSKPKSSYHVSTPSDHSFPEDFDPVCSFGSSHSSYSTSKSSPQTGSAFEKQNGDGSFRLSGESNGCRSGETEKFEHSSPEASCSHSRSESVSSSISSSDYVNPVSKGVSAIPNKHQNVLCREIINEHPANKESGISTRFSGKQSQIPESKIVVMENGNNHRKNNNIINSHTEVDSVPASNLQHDELTTISHVNKLIEDLQSKSNEVQTAAAEELRLLTKNNMENRVIVGKCGAVTPLLSLLYSNVKITQEHAVTALLNLSIYEDNKSLIMEAGAIEPLIHVLKTGNDGAKENSAAALFSLSVIENNKEKIGRSSAVKALVDLLASGTLRGKKDAATALYNLSIFHDNKARIVQAGAVKYLTQLLDPADRMVDKAVALLANLSTIAEGRIEITRQGGIPLLVEILESGSQRGKENAASILFQLCLHSSKFCTLVLQEGAVPPLVALSQSGTTRAKEKAQQLLSHFRNQREVAAGKGRS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00137 797 MobiDBLite consensus disorder prediction 403 421 - -
Arst6g00137 797 Pfam Armadillo/beta-catenin-like repeat 626 662 IPR000225 GO:0005515
Arst6g00137 797 Pfam Armadillo/beta-catenin-like repeat 584 621 IPR000225 GO:0005515
Arst6g00137 797 Pfam Armadillo/beta-catenin-like repeat 543 580 IPR000225 GO:0005515
Arst6g00137 797 ProSiteProfiles U-box domain profile. 243 317 IPR003613 GO:0004842|GO:0016567
Arst6g00137 797 MobiDBLite consensus disorder prediction 353 421 - -
Arst6g00137 797 PANTHER U BOX DOMAIN-CONTAINING 37 785 - -
Arst6g00137 797 SMART arm_5 704 744 IPR000225 GO:0005515
Arst6g00137 797 SMART arm_5 664 703 IPR000225 GO:0005515
Arst6g00137 797 SMART arm_5 623 663 IPR000225 GO:0005515
Arst6g00137 797 SMART arm_5 541 581 IPR000225 GO:0005515
Arst6g00137 797 SMART arm_5 582 622 IPR000225 GO:0005515
Arst6g00137 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 593 635 IPR000225 GO:0005515
Arst6g00137 797 Coils Coil 512 532 - -
Arst6g00137 797 FunFam RING-type E3 ubiquitin transferase 240 317 - -
Arst6g00137 797 FunFam RING-type E3 ubiquitin transferase 495 790 - -
Arst6g00137 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 634 676 IPR000225 GO:0005515
Arst6g00137 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 675 716 IPR000225 GO:0005515
Arst6g00137 797 MobiDBLite consensus disorder prediction 388 402 - -
Arst6g00137 797 SUPERFAMILY RING/U-box 242 319 - -
Arst6g00137 797 SMART Ubox_2 247 310 IPR003613 GO:0004842|GO:0016567
Arst6g00137 797 MobiDBLite consensus disorder prediction 353 387 - -
Arst6g00137 797 Coils Coil 67 87 - -
Arst6g00137 797 CDD RING-Ubox_PUB 245 297 IPR045210 -
Arst6g00137 797 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 552 594 IPR000225 GO:0005515
Arst6g00137 797 SUPERFAMILY ARM repeat 508 784 IPR016024 -
Arst6g00137 797 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 318 IPR013083 -
Arst6g00137 797 Coils Coil 192 219 - -
Arst6g00137 797 Gene3D - 455 586 IPR011989 -
Arst6g00137 797 Pfam U-box domain 244 314 IPR003613 GO:0004842|GO:0016567
Arst6g00137 797 Gene3D - 587 794 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00137 Arst-Chr6 1284396 1288740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00137 15 797 U-box Gene Family AT3G54790 53.038 0.0 717