Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00136 ATGCTCCATTTTCATTGGGCAGGTCAAACGAATACAACTTCAGCGAAATGTCTCATCAACAGCATTTCACGATTCATTCATCTAGTTTCTTGCCATACAGTAAAGCCTACCCCCCTTAAGAAGAACTTTGATAATATGGTTAGTGTGTTGAAGCGTTTGAAACCTGTGCTCGATGATGTTGTGGATCACAATCTCCCTTTGGAGGAAAATCTGTATAGAGAATGCGAGGAATTGGATATGTTGGTTAATGAAGCTAGAGAGCTCATTGAAAAATGGGGCCCAAAGATGAGCAAGATTCGCAGCGTTCTTCGAAGTGGTAAATTGCTGATCAAGTTACAGAGTGCTTCACTTTATATTTGTCGTGTGATTGTTAGATCCCTAAAGTCACCTTCAAATCCTTCAGTTTTGTCCAATCTTCAGCAATATATGCAGGACCTTCAGCATCTTAAGAAGGAGACAGCAGTGGTCTATATAGAAGAAGCACTTAGAAACCAAAGGAATAATGTTCAAACTTCAAATGATCGTCTAAAAGGAATTATTGAGTTACTTCACCTTACATCAAACCAGGAGCTTTTAAAAGAAAGTATTGCTGCGGAAAAGGAAAAGTTGAACACTGAAGTCAATAAAATGAAAGAGGAACTGGATGAAATTAACCAAATTGTGAATCTTGTCTGCAACTTACGCGAGTATGTGTTGAAATTTGAGTGCCGTGAAGTCAAACACGGTGTCTCTATCCCACAATATTTTAGATGTCCTTTATCATTGGAACTTATGTCAGAACCTGTTATTGTGGCTTCTGGTCAAACATACGAGAGGCAATCCATTCAAATTTGGCTTGATCATGGCCTGACTGTTTGTCCCAAGACTCATCAGAGACTTTCCCATACAAATCTTATTCCGAATTATACCGTGAAAGCTATGATAGCAAACTGGTGTGAGGAAAATGCTGTCAAACTTCCCAATAACTCTAAGCCTAAAAGTTCTTACCATGTTTCAACCCCGTCAGATCATTCATTTCCTGAAGATTTTGATCCTGTGTGTAGTTTTGGGTCTTCACATAGTAGCTATTCCACTTCAAAATCGTCCCCTCAAACTGGAAGTGCATTTGAGAAGCAAAATGGTGACGGTTCTTTCAGACTAAGTGGAGAATCAAATGGATGCAGAAGTGGAGAGACAGAAAAGTTTGAGCACTCATCCCCTGAGGCTTCATGTAGTCACAGCAGAAGTGAATCAGTGTCAAGTTCTATTTCTAGCAGTGATTATGTAAACCCAGTTTCAAAAGGGGTGTCAGCCATACCTAATAAGCATCAAAATGTGTTGTGCAGAGAAATCATAAATGAGCATCCTGCAAATAAAGAATCAGGGATTTCTACTCGGTTTTCAGGAAAGCAATCTCAAATCCCTGAATCCAAAATTGTAGTGATGGAGAACGGAAATAATCATAGAAAGAATAATAATATTATTAATAGCCACACGGAAGTTGATTCGGTTCCTGCTTCCAACTTACAGCATGATGAACTAACTACCATATCTCATGTCAACAAGTTGATTGAAGACCTTCAGAGTAAGTCAAATGAGGTGCAAACTGCTGCTGCAGAAGAATTGAGGCTCCTTACCAAGAATAACATGGAAAACCGTGTCATTGTTGGGAAGTGTGGTGCAGTTACACCATTACTTTCACTGCTGTATTCGAATGTGAAGATAACACAAGAACATGCTGTGACAGCTCTTCTGAATTTGTCAATTTACGAGGACAACAAGTCTTTGATTATGGAAGCAGGAGCCATAGAACCACTGATCCACGTTTTGAAGACAGGAAATGATGGTGCCAAGGAGAATTCTGCAGCAGCACTATTCAGCCTCTCCGTAATAGAAAACAATAAGGAAAAAATTGGCCGTTCCAGTGCAGTTAAAGCTTTGGTGGATCTTCTAGCCTCAGGAACACTAAGGGGAAAGAAGGATGCTGCCACTGCTTTATATAACTTATCAATATTTCACGACAATAAAGCTCGGATAGTTCAAGCTGGAGCTGTGAAGTATCTGACTCAGTTATTGGACCCAGCTGACAGAATGGTTGACAAGGCTGTTGCTCTTTTAGCAAATCTCTCAACAATTGCAGAGGGTCGAATAGAAATAACAAGGCAAGGGGGAATTCCCTTGCTAGTTGAAATTTTGGAATCAGGTTCTCAAAGGGGGAAGGAAAATGCTGCTTCTATTCTCTTCCAACTATGCCTTCATAGTTCGAAGTTTTGTACCCTCGTTCTGCAAGAAGGAGCTGTACCACCCCTTGTTGCATTGTCTCAGTCCGGCACGACAAGAGCAAAAGAAAAGGCGCAACAGCTACTCAGTCATTTCCGTAATCAGCGTGAAGTGGCTGCCGGGAAGGGAAGATCATGA 2397 0.4063 MLHFHWAGQTNTTSAKCLINSISRFIHLVSCHTVKPTPLKKNFDNMVSVLKRLKPVLDDVVDHNLPLEENLYRECEELDMLVNEARELIEKWGPKMSKIRSVLRSGKLLIKLQSASLYICRVIVRSLKSPSNPSVLSNLQQYMQDLQHLKKETAVVYIEEALRNQRNNVQTSNDRLKGIIELLHLTSNQELLKESIAAEKEKLNTEVNKMKEELDEINQIVNLVCNLREYVLKFECREVKHGVSIPQYFRCPLSLELMSEPVIVASGQTYERQSIQIWLDHGLTVCPKTHQRLSHTNLIPNYTVKAMIANWCEENAVKLPNNSKPKSSYHVSTPSDHSFPEDFDPVCSFGSSHSSYSTSKSSPQTGSAFEKQNGDGSFRLSGESNGCRSGETEKFEHSSPEASCSHSRSESVSSSISSSDYVNPVSKGVSAIPNKHQNVLCREIINEHPANKESGISTRFSGKQSQIPESKIVVMENGNNHRKNNNIINSHTEVDSVPASNLQHDELTTISHVNKLIEDLQSKSNEVQTAAAEELRLLTKNNMENRVIVGKCGAVTPLLSLLYSNVKITQEHAVTALLNLSIYEDNKSLIMEAGAIEPLIHVLKTGNDGAKENSAAALFSLSVIENNKEKIGRSSAVKALVDLLASGTLRGKKDAATALYNLSIFHDNKARIVQAGAVKYLTQLLDPADRMVDKAVALLANLSTIAEGRIEITRQGGIPLLVEILESGSQRGKENAASILFQLCLHSSKFCTLVLQEGAVPPLVALSQSGTTRAKEKAQQLLSHFRNQREVAAGKGRS 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00136 798 Coils Coil 193 220 - -
Arst6g00136 798 Gene3D - 456 587 IPR011989 -
Arst6g00136 798 SUPERFAMILY ARM repeat 509 785 IPR016024 -
Arst6g00136 798 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 594 636 IPR000225 GO:0005515
Arst6g00136 798 SUPERFAMILY RING/U-box 243 320 - -
Arst6g00136 798 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 635 677 IPR000225 GO:0005515
Arst6g00136 798 ProSiteProfiles U-box domain profile. 244 318 IPR003613 GO:0004842|GO:0016567
Arst6g00136 798 MobiDBLite consensus disorder prediction 404 422 - -
Arst6g00136 798 Pfam Armadillo/beta-catenin-like repeat 544 581 IPR000225 GO:0005515
Arst6g00136 798 Pfam Armadillo/beta-catenin-like repeat 585 622 IPR000225 GO:0005515
Arst6g00136 798 Pfam Armadillo/beta-catenin-like repeat 627 663 IPR000225 GO:0005515
Arst6g00136 798 CDD RING-Ubox_PUB 246 298 IPR045210 -
Arst6g00136 798 PANTHER U BOX DOMAIN-CONTAINING 38 786 - -
Arst6g00136 798 FunFam RING-type E3 ubiquitin transferase 241 318 - -
Arst6g00136 798 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 676 717 IPR000225 GO:0005515
Arst6g00136 798 Pfam U-box domain 245 315 IPR003613 GO:0004842|GO:0016567
Arst6g00136 798 Coils Coil 68 88 - -
Arst6g00136 798 Coils Coil 513 533 - -
Arst6g00136 798 FunFam RING-type E3 ubiquitin transferase 496 791 - -
Arst6g00136 798 MobiDBLite consensus disorder prediction 389 403 - -
Arst6g00136 798 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 319 IPR013083 -
Arst6g00136 798 MobiDBLite consensus disorder prediction 354 388 - -
Arst6g00136 798 SMART Ubox_2 248 311 IPR003613 GO:0004842|GO:0016567
Arst6g00136 798 MobiDBLite consensus disorder prediction 354 422 - -
Arst6g00136 798 Gene3D - 588 795 IPR011989 -
Arst6g00136 798 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 553 595 IPR000225 GO:0005515
Arst6g00136 798 SMART arm_5 624 664 IPR000225 GO:0005515
Arst6g00136 798 SMART arm_5 665 704 IPR000225 GO:0005515
Arst6g00136 798 SMART arm_5 705 745 IPR000225 GO:0005515
Arst6g00136 798 SMART arm_5 583 623 IPR000225 GO:0005515
Arst6g00136 798 SMART arm_5 542 582 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00136 Arst-Chr6 1284396 1288741 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00136 16 798 U-box Gene Family AT3G54790 53.038 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00136 - - gmx:100804684 1071.23