Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00131 ATGAAGTCGGATTATGGAAGTAATATTGCCAAATTAAAGGAGATGGGAGAGCTTTCAGCTCCCCCTGGTTTTGCATCGCTTACATCTTTCATTTTGAAAAAGGGTAAAAAGGTTACAGAAAATGACAAACTTGCAACCTGTCTGAATGAAACTAAGCACGTGCCAGTTGATGCAGACGGTAAAAACGACGTGAATGATATTGGTACATATTACCAGATTTTTAAGAATCGACCCTGGATACTCTCTGACCAGAGCAAGAGCAACGACAAACCTGAGGAGTGTCACACTGAATTTATTCCTATGGATCACTCGTCAAATGCTAGTCGTCCAGAAGGGATCACTCGTGGATGTCCAAACTGCAATAATTGTTTGAAGGTAACAGCAAGGTGGCATCCTGAGGATGCAACGAGAGAAGCCCTTGAAGAAGCTCCTCTTTTCAACCCAACAGAAGAGGAATTCAATGACACCCTCAAATATATTGCAAGCATACGATCTAGCGCAGAGCCTTATGGAATTTGTCGTATTGTACCTCCTACTCGCTGGAAACCACCATGTTCTCTTGAGGAAAAGAACTTATGGGAAGGCTCTGAATTTGTTGCTCAAATTCAACGAATAGATGGAATCCAAGTTAAGCATGCAGAAGAAAATGTTGCTAGTTCTTGTGAAAATACAAAGGCCAAGAGAAGAAGGGTGACACCAGTAGATTTGGACTCTCATCTTGCGAATGCAAGCACTTGCACCGTAAATAGTCAGGGTGTTGAAGATTGTGTCTCTGAACCCTGTCCTAAATTCAGTCTCAAGACGTTTAAGAATTTTGCTGATGAATTCAAAATCCAGTACTTTGATTACAAGGGCAAGAATAAGAATGTGGGTTCTGATTTAAATTTAGATACAAATCAACATAAGTGGGAGCCATCTGTGGAGAATATTGAGGGTGAATATGGAAGGATTGTTCAAAATCCAACTGAAAAAATTGAGGTGCTTCATGGTAACACTTTGGAGGCTGAAGGTTTTAGCAGTGGATTTCCTACAGCTGCTGATTCTGGGGAGGAACACATTTCCCCTGAATATTTGAAATCTGGATGGAACTTAAACAACATAAATTCATTGCCTGGTTCTCTTCTTTCTTTTGAAAGCTCTGGTGCTTCACATAATTTTGGTCATCGAATTCATGTTGGAATGTGCTTCACTCTGCAAAAATGGGTAATGTCGCTGACTTACAGTATACTTGCATCTTCATCACGGTCTTCTTTCCAACATCTTAGTTACAAAAATTATTTAATAAGCAAAATTATGGTAGAAGAAAGAAATTTACCACGAAGATATGCTGCCAACTATGAAACAATTAGGAAGAAGTATTTATCAGGTCTGCATGCAAGACAGCCTGATATTGATGATAATCTGATGATGCAGTTATCCTGCTTCATATTGAAGGCAGAGGGCATACCTGTATATCGCTGTGTTCAATATCCTCGTGAGTTTGTTCTTGTCTTCCCAGGAGCATATCATTCTGGATTTGATTGTGGTTTCAATTGTTCTGAATCAGTAAACTTTGCTCCTCTCGAGTGGCTTCTTCATGGACTGAATGTGGTAGAGCTATATTGTGAGAAGAGGAAAAAGACATTAATTTCGTATGATAAACTTTTGCTGGGAGCAGCAAAGGAAGCTGTAAGGGCACGATGGGAAATCGATCTGTGTATGAACGACATGACAGATAAATTAACATGTAAAGATGCGTATCAAAGAAATGGGATCTTAGCAAAAGCTCTGGGTGCTCGTGTTAAGAGCGAAAGTATCAAGAGAGAATACCTATGCAGTTCTTTGAAATCACAAAGAATGGATGAAAGTTTTGACACTTGTGTCAAAAGGGAATGCGGCATATGTCTGTGTGATTTACACTTGTCTGCTGTACATTGTTTGTGTTCAGAAGACAAGTTTGCGTGCCTGGATCACGCGAAACAGCTTTGTCCATGCAGTTGGAGCAACAAAATCCTCCTCTACCGTTATGAAATTAGCGAGTTGAATGTTCTTTGTCAAGCTTTGGAAGGAAAGTTAAGTGCAGTCTATAAATGGGCGAAAGAGTATCTTGGATTAAGATTTCAGTCTGTTGCCTCCAATAGACAAATGAAACAAAACGGAGCGGCATCAGGAATCGTGGGGAACCCTCGCGGCAATTGTATTAGTTCTTTCAGCATTACCCCAAAAGAGAAGACGAAAGCAAAAGAGAAAACGTTGGGGGGCCGACCTCCTAGATCATGTGCTAATGGAGGAACCAATTCCACCAGTATCAAAACTGATATGAAGGCACCTGTGAGTAAGAGTAAGCCAACAACTTCAAAGAAGGTACAGCGCGATCAGAAAGTATCTACAGTTTCTTCGATCACCAACTCACGATACTTGTCTTTTCTACAGCAAAATACATTAGTCGAAGTGCCATCTGATAGTTGCTCTTCCTCTTCCTCAGAATCTGACAATGCGTAA 2481 0.4047 MKSDYGSNIAKLKEMGELSAPPGFASLTSFILKKGKKVTENDKLATCLNETKHVPVDADGKNDVNDIGTYYQIFKNRPWILSDQSKSNDKPEECHTEFIPMDHSSNASRPEGITRGCPNCNNCLKVTARWHPEDATREALEEAPLFNPTEEEFNDTLKYIASIRSSAEPYGICRIVPPTRWKPPCSLEEKNLWEGSEFVAQIQRIDGIQVKHAEENVASSCENTKAKRRRVTPVDLDSHLANASTCTVNSQGVEDCVSEPCPKFSLKTFKNFADEFKIQYFDYKGKNKNVGSDLNLDTNQHKWEPSVENIEGEYGRIVQNPTEKIEVLHGNTLEAEGFSSGFPTAADSGEEHISPEYLKSGWNLNNINSLPGSLLSFESSGASHNFGHRIHVGMCFTLQKWVMSLTYSILASSSRSSFQHLSYKNYLISKIMVEERNLPRRYAANYETIRKKYLSGLHARQPDIDDNLMMQLSCFILKAEGIPVYRCVQYPREFVLVFPGAYHSGFDCGFNCSESVNFAPLEWLLHGLNVVELYCEKRKKTLISYDKLLLGAAKEAVRARWEIDLCMNDMTDKLTCKDAYQRNGILAKALGARVKSESIKREYLCSSLKSQRMDESFDTCVKRECGICLCDLHLSAVHCLCSEDKFACLDHAKQLCPCSWSNKILLYRYEISELNVLCQALEGKLSAVYKWAKEYLGLRFQSVASNRQMKQNGAASGIVGNPRGNCISSFSITPKEKTKAKEKTLGGRPPRSCANGGTNSTSIKTDMKAPVSKSKPTTSKKVQRDQKVSTVSSITNSRYLSFLQQNTLVEVPSDSCSSSSSESDNA 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00131 826 SUPERFAMILY Clavaminate synthase-like 439 562 - -
Arst6g00131 826 ProSiteProfiles JmjN domain profile. 143 184 IPR003349 -
Arst6g00131 826 MobiDBLite consensus disorder prediction 735 792 - -
Arst6g00131 826 ProSiteProfiles JmjC domain profile. 356 535 IPR003347 -
Arst6g00131 826 Gene3D Cupin 128 519 - -
Arst6g00131 826 Pfam jmjN domain 144 177 IPR003349 -
Arst6g00131 826 SMART JmjN_1 142 183 IPR003349 -
Arst6g00131 826 PANTHER LYSINE-SPECIFIC DEMETHYLASE 439 787 - -
Arst6g00131 826 SMART cupin_9 356 535 IPR003347 -
Arst6g00131 826 Pfam JmjC domain, hydroxylase 442 518 IPR003347 -
Arst6g00131 826 Pfam C5HC2 zinc finger 625 675 IPR004198 -
Arst6g00131 826 MobiDBLite consensus disorder prediction 753 792 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00131 Arst-Chr6 1234205 1239956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00131 19 744 JUMONJI Transcription Factor Family AT1G08620 41.278 2.03e-168 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Arst6g00131 JmjC 6.9e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00131 K11446 - aip:107646673 1589.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00131 6 1234205 1239956 Arst6g00131 6 1234205 1239956 ECH