Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00128 ATGGGGCTTCGAGACATAGGAGCATCACTTCCACCAGGGTTCAGATTCTACCCGAGTGATGAGGAATTGGTTTGCCATTATCTTTATAAGAAGATCACAAACCAGCAACTTCTTAAAGGCACTCTTGTTGAGATTGATTTACACATATGCGAGCCATGGCAGCTTCCAAAGGTGGCAAAGCTAAATGCAAATGAATGGTACTTCTTCAGCTTCAGAGACAGGAAATATGCGACGGGGTTCAGAACGAACAGAGCGACGACAAGTGGTTATTGGAAAGCAACGGGGAAGGATCGAACGGTGCAGGATCCACTTACGCAAGAGGTTGTAGGGATGCGCAAGACTCTGGTGTTCTACCGGAACAGAGCTCCCAATGGCATCAAAACTGGCTGGATCATGCATGAGTTTCGGTTGGAGACCCCACACATGCCCCCTAAGGAAGATTGGGTGTTGTGTAGAGTGTTCCACAAAAGCAAAGAAGAAAACAGTGGCAAACTTATCATGTATGATTCCATTTCCACACATCATGAATCATCAAACTCTATGGCATTGGTATCAACCCATCATTTGAACCCCATCAACAACCATAATGCCATGAATAATTTCCTTCATCACTTCTCATCATCAAGGGATGATAGTCAAACAAATAACGCCAATAATAATAATAATAATAGTCCCAAGGGTTATGATGGATATGGCTTCATATGGGATCACATGGATCTTGAAGATCATAGTGTGCCCTCATCAGACTTCCAGGTCGACAATAATAATAATAATAATAATATTGCATTGCTATAA 795 0.4239 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNQQLLKGTLVEIDLHICEPWQLPKVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVQDPLTQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKEENSGKLIMYDSISTHHESSNSMALVSTHHLNPINNHNAMNNFLHHFSSSRDDSQTNNANNNNNNSPKGYDGYGFIWDHMDLEDHSVPSSDFQVDNNNNNNNIALL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00128 264 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 218 - -
Arst6g00128 264 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Arst6g00128 264 Gene3D NAC domain 19 162 IPR036093 GO:0003677|GO:0006355
Arst6g00128 264 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Arst6g00128 264 MobiDBLite consensus disorder prediction 205 225 - -
Arst6g00128 264 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00128 Arst-Chr6 1177605 1181532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00128 6 183 NAC Transcription Factor Family AT1G56010 53.226 1.82e-65 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst6g00128 NAM 8.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00128 - - ahf:112754075 383.259