Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00117 ATGGATTCTGCAAGAAGTTGGCTTCACAAATTTCAGCCACGAGAGAAAGGGAAGAGCGCTAGCAGAAGGAAAGAAGGTGACGGAGAAGAGGATAATAATGGTGCTCCCATGGATGAAGCAGCTCTTTCAAATGTCACAAAGCAGAAGGTTGCAGCAGCCAAACAGTATATTGAGAATCATTACAAAGAGCAAATGAAGAGCCTTCAGGAAAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTAGCTGATGCTGATGTGTCTGAGGAGGATCAAAACAACCTACTTAAATTTCTAGAGAAAAAAGAAACTGAATATATGCGCCTTCAGAGGCATAAGATGGGAGTTGATGATTTCGAGTTATTGACCATGATTGGCAAAGGTGCATTTGGAGAGGTTAGAGTATGTAGAGAAAAGACAACAGGTCATGTATATGCAATGAAAAAATTAAAGAAAGCAGAGATGCTTCGTAGAGGCCAGGTAGAACATGTTAGAGCCGAGAGAAATCTCCTTGCCGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCTTTTCAAGATGAGGATCATCTGTATCTTATTATGGAGTACCTACCTGGTGGGGATATGATGACTCTACTTATGAGAAAGGACATCTTGACTGAAGATGAAACCCGTTTTTATATAGGAGAAACCGTTCTGGCTATTGAGTCTATACATAAACACAATTACATACATAGGGATATTAAGCCTGATAACTTATTGCTCGATAGATTCGGACATGTGAGGCTGTCAGATTTTGGACTTTGTAAACCATTAGACTGTAGTACACTTGAAGAAGCAGATCTTTCTGTAGGTCAAAATCTTCAGGGATCTGCACAAAATGATGGCACAACTCCAAAACGCACACAACAAGAACAGTTGGAACACTGGCAGCAAAACAGAAGGACTCTTGCCTATTCTACTGTTGGTACACCTGATTATATTGCTCCAGAAGTCTTATTGAAAAAGGGTTATGGGATGGAGTGTGATTGGTGGTCACTTGGAGCCATTATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTCAACATGTAGGAAGATAGTAAACTGGAAATCTCACTTGAAATTTCCAGAAGAAGCGAGACTATCTCCAGAGGCTAAAGATCTTATTAGTAAGCTTTTGTGTAACGTCCCTCAGAGGCTAGGATCAAATGGTGCAGATGAAATAAAGGCTCATCCATTTTTTAATGGTGTTGTTTGGGACAAGTTGTATCAAATGGAAGCTGCATTTATTCCTGAAGTCAATGATGAGTTAGATACTCAAAATTTTGAAAAGTTTGAAGAGTCAGATAACCATGTTCTGAAATCAGCATCAAGATCTGGTCCATGGAGAAAGATGCTTTCATCTAAGGACATGAATTTTGTGGGATATACATACAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCTGGAATGGCTGAATTGAAGAAGAAAAGTTCCAGATCAAAGAAGCCATCCATCAAGTCACTCTTCGATGTTGATCCTGAGGGATCAGAGTTGTCCGAGGCTGTAGATGCATCTGCAACCAACCAATCAGAGGAATCCCATAACAAGAATGAATGA 1629 0.3972 MDSARSWLHKFQPREKGKSASRRKEGDGEEDNNGAPMDEAALSNVTKQKVAAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKAEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDEDHLYLIMEYLPGGDMMTLLMRKDILTEDETRFYIGETVLAIESIHKHNYIHRDIKPDNLLLDRFGHVRLSDFGLCKPLDCSTLEEADLSVGQNLQGSAQNDGTTPKRTQQEQLEHWQQNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCNVPQRLGSNGADEIKAHPFFNGVVWDKLYQMEAAFIPEVNDELDTQNFEKFEESDNHVLKSASRSGPWRKMLSSKDMNFVGYTYKNFEIVNDYQVPGMAELKKKSSRSKKPSIKSLFDVDPEGSELSEAVDASATNQSEESHNKNE 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00117 542 MobiDBLite consensus disorder prediction 499 542 - -
Arst6g00117 542 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Arst6g00117 542 Pfam Protein kinase domain 120 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00117 542 SMART pkinase_C_6 417 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Arst6g00117 542 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 469 - -
Arst6g00117 542 SUPERFAMILY Protein kinase-like (PK-like) 92 459 IPR011009 -
Arst6g00117 542 Gene3D Phosphorylase Kinase; domain 1 117 445 - -
Arst6g00117 542 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Arst6g00117 542 MobiDBLite consensus disorder prediction 1 31 - -
Arst6g00117 542 CDD STKc_NDR_like 117 481 - -
Arst6g00117 542 SMART serkin_6 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00117 542 ProSiteProfiles Protein kinase domain profile. 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00117 542 MobiDBLite consensus disorder prediction 1 39 - -
Arst6g00117 542 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Arst6g00117 542 MobiDBLite consensus disorder prediction 281 300 - -
Arst6g00117 542 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Arst6g00117 542 Pfam Protein kinase C terminal domain 435 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
Arst6g00117 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Arst6g00117 542 Gene3D Transferase(Phosphotransferase) domain 1 203 434 - -
Arst6g00117 542 CDD MobB_NDR_LATS-like 53 114 - -
Arst6g00117 542 FunFam Non-specific serine/threonine protein kinase 203 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00117 Arst-Chr6 1094093 1098907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00117 1 513 AGC Kinase Gene Family AT2G20470 78.185 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Arst6g00117 Pkinase 1.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00117 K08790 - gmx:100805940 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00117 6 1094093 1098907 Arst6g00117 6 1094093 1098907 PCT