Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00102 ATGGGAAATGGAAATAGGCAGGGGAGGAGGAAGAAGAGGAGGAGTTTGAAAAACATGATGCAGTGCCTGTGCTCAGGGGAGCAGTTGAGACGAGAAGGAGGCATGGATGAGATGGCAGTTCCTTCGTCATCGGATTCTCTTGCCACTAAGGACTATTATTCGGCCACGACTGGCAGCGGCCGTTCTGGACAGGATGGACAACTTCAAAGGAGGCTGGATGCAGGAAATATCGAAGAAGCTGAATCGTCGTTGCGTGAGGCCGGCTGCTTGAATTATGAGGAAGCTAGAGCTCTGTTAGGAAGATATGAATATCAGAAAGGGAATATAGAAGCTGCTTTACATGTTTTTGAGGGAATAAATATAGACTCTGTGACTCCAGAGATAAAAATTTCTCTTGCCAAAATAAAAGAGAACCATAGGAGACATTCCAAGAATTATGTTCCGCCGCCAATGTCTGTACATACTGTTGGCACACTGTTTGAAGCAGTTTTCCTTAAAGCACAATGTTTGCAGGCTCTGGGAAGGTTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGACTCTTTGTTGCCTGAAGGCTCGTGTAAAAACTTTGGTGCTGAATGTAAATTGCAGGACACTGTAACTAAGGCAGTTGAGCTACTTCCAGAATTATGGAAACTTGCTGATTGTCCACATGAAGTTATCATGGCTTACCGACAGGCTCTCCTACGTCGGTGGAACCTTTCCTCCGAGACCATAGCAAAGATTCAGAAAGAATTTGCTGCTTTTCTTCTTTATAGCGGAGCGGAAGTAATCCCCCCAGATCTCCGTTCACAAAAGGAAAACTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTAATTTTAATTATTTTGCTAAGAAAAGTCTCTTTGAATGAAATTGAGTGGGATCCTTCAATTTTGGACCACCTTTCATTTGCTCTGTCGGTTTCAGGGGATTTGACAGCTTTAGCCAATCAATGGGAAGAATTGCTTCCTGGGACTATTAATCGAGGAGAAAGATATTATGCCCTTGCTCTTTGTTATTATGGTGCTGGTCAAGACCTGGTAGCATTGAATCTTCTTAAAAAATTATTAAGTAGCAACGAAGATCCAAAACATGTTCCAGCTTTGTTGATGGCTTCTAACATTTGTTGCAAGAACCCCAATCTTGCAGAAGATGGGGTCAACTATGCTCGCCGAATGCTAGAGAACTTGAATGGCAGATGTGACCAGTTGGAAAGTCGTGCAAATTGCTTACTTGGTATTTCACTTTCAGCACACTCAAAAATAGCTGTTTCTGATTCCGAGCGGATTCGGAGACAGTCCAAGGCACTTCAGTTTCTGGAAACTGCAAGGAGAATGACTAGAATGAGAGACCCGTTTATATTGTACTATCTTAGTTTAGAATATGCAGATCAAAGGGAGTTGGATTCTGCACTTCATTATGCTGAGTGCTTTCTGGAACTGGAAGCTAGGGCTAGTATTAAAGGGTGGTTGTTGTTAGCCCGGATATTATCAGCACAAAAACGGTTTTTGGATGCTGAATCTGTTGTTAATGCTGCTTTGGATCAGACTGCAAAATGGGATCAAGGAGAACTGTTGCGAACAAAAGCTAAACTGCAAATTGCACAGGGCCAGTTAAGGAGTGCCTTTGAGACATATGTTCAGCTTCTTTCTATTCTTCATATTCAACGGAAAACTTTTGGTCAATGGAAGAAGCTGTGTAAGGATTCTAGAGATCATGCTTGGAACTTGGAATTGGAATTATGGCATGATCTTGCTTATGTCTATATATCTCTGTCGTGTTGGCATGATGCAGAGATGTGTCTTTCTAGATCTAAAGCCATAAAACCATACACTGCATCAAGGTTGCATGCACTGGGTACAATGCACGAGGCAAAGGGTCTTTACAAGGAGGCTCTAAAAGCATTTCGAGATGCTTTGGATATCGATCCGGGACATGTCCCTAGCTTGATATCCTCTGCTGTGGTTCTTAGACAGTTCAATGGTCAGTCAAATGCTGCCATCAGAAGCTTTCTGATGGACGCACTACGGCATGACAGGATGAACGCTTCTGCATGGTACAATCTTGGCATTCTTCACAAGGCCGAAAATAAAATATCAGAAGCTGCAGAATGTTTTGAGGCAGCAAACTCCCTAGAAGAATCAGCACCAGTTGAACCATTCAGATGA 2214 0.4268 MGNGNRQGRRKKRRSLKNMMQCLCSGEQLRREGGMDEMAVPSSSDSLATKDYYSATTGSGRSGQDGQLQRRLDAGNIEEAESSLREAGCLNYEEARALLGRYEYQKGNIEAALHVFEGINIDSVTPEIKISLAKIKENHRRHSKNYVPPPMSVHTVGTLFEAVFLKAQCLQALGRFKEAAQSCKVILDIVDSLLPEGSCKNFGAECKLQDTVTKAVELLPELWKLADCPHEVIMAYRQALLRRWNLSSETIAKIQKEFAAFLLYSGAEVIPPDLRSQKENSFVPRNNIEEAILILIILLRKVSLNEIEWDPSILDHLSFALSVSGDLTALANQWEELLPGTINRGERYYALALCYYGAGQDLVALNLLKKLLSSNEDPKHVPALLMASNICCKNPNLAEDGVNYARRMLENLNGRCDQLESRANCLLGISLSAHSKIAVSDSERIRRQSKALQFLETARRMTRMRDPFILYYLSLEYADQRELDSALHYAECFLELEARASIKGWLLLARILSAQKRFLDAESVVNAALDQTAKWDQGELLRTKAKLQIAQGQLRSAFETYVQLLSILHIQRKTFGQWKKLCKDSRDHAWNLELELWHDLAYVYISLSCWHDAEMCLSRSKAIKPYTASRLHALGTMHEAKGLYKEALKAFRDALDIDPGHVPSLISSAVVLRQFNGQSNAAIRSFLMDALRHDRMNASAWYNLGILHKAENKISEAAECFEAANSLEESAPVEPFR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00102 737 SUPERFAMILY TPR-like 159 377 IPR011990 GO:0005515
Arst6g00102 737 MobiDBLite consensus disorder prediction 42 66 - -
Arst6g00102 737 Pfam Tetratricopeptide repeat 630 660 IPR019734 GO:0005515
Arst6g00102 737 Pfam Tetratricopeptide repeat 698 729 IPR019734 GO:0005515
Arst6g00102 737 MobiDBLite consensus disorder prediction 33 69 - -
Arst6g00102 737 Coils Coil 402 422 - -
Arst6g00102 737 SUPERFAMILY TPR-like 540 728 IPR011990 GO:0005515
Arst6g00102 737 PANTHER PROTEIN NPG1 20 737 IPR043376 -
Arst6g00102 737 SMART tpr_5 502 535 IPR019734 GO:0005515
Arst6g00102 737 SMART tpr_5 594 627 IPR019734 GO:0005515
Arst6g00102 737 SMART tpr_5 628 661 IPR019734 GO:0005515
Arst6g00102 737 SMART tpr_5 345 378 IPR019734 GO:0005515
Arst6g00102 737 SMART tpr_5 698 731 IPR019734 GO:0005515
Arst6g00102 737 SMART tpr_5 160 193 IPR019734 GO:0005515
Arst6g00102 737 PANTHER PROTEIN NPG1 20 737 IPR043376 -
Arst6g00102 737 ProSiteProfiles TPR repeat profile. 628 661 IPR019734 GO:0005515
Arst6g00102 737 Gene3D Tetratricopeptide repeat domain 145 431 IPR011990 GO:0005515
Arst6g00102 737 SUPERFAMILY TPR-like 345 567 IPR011990 GO:0005515
Arst6g00102 737 Gene3D Tetratricopeptide repeat domain 575 733 IPR011990 GO:0005515
Arst6g00102 737 Gene3D Tetratricopeptide repeat domain 442 574 IPR011990 GO:0005515
Arst6g00102 737 ProSiteProfiles TPR repeat profile. 698 731 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00102 Arst-Chr6 1009969 1014623 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00102 10 737 Calmodulin-binding Proteins AT4G28600 54.839 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00102 K21843 - gmx:100784353 1001.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00102 6 1009969 1014623 Arst6g00102 6 1009969 1014623 ECH
Arst6g00102 6 1009969 1014623 Arst6g00101 6 1009969 1014867 PCT
Arst6g00102 6 1009969 1014623 Arst6g00102 6 1009969 1014623 PCT