Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00095 ATGACAGTTCTAGTTTTCTCATCAACACTTGCACAAATTTCAGCACAGAAAGAAGCAGAATCACTGATGAGATGGATGAAAAGTTTGAACTCTCCGATGTTGTCTTCATGGAACATCACAAATAACAACACAAGTCCATGCAACTGGAAAGGAATCAAGTGTAACAATGGTGGAAGTGTTGTTGATATAAAGCTTCCAAATTCAGGCCTTGATGGAACTCTCAACAGGTTTGATTTCTCTTCTTTTCCTAATCTCACTACACTCAATCTCACCATGAACAACCTTGTTGGAAAAATCCCATCTGAGATAGGAAATTTAACAAAATTGCAAGTTCTTGATCTTAGTAGCAACAATTTCACATATCAAATGCCACCAAAAATAGGTAACCTCTTAGAGCTACAAGTTCTAATCCTATCAAACAATTCATTGTTGCAACAAATTCCATATGAACTTAGCAATCTGCAGAATTTAAGAATTCTTGAACTAGGTGGTAACTTTTTAAGCAATCCTGACCCAAAATTCAAGGGCATGACATCCCTAACAGACCTTAACCTCACATATAATTCTCTCACAGAATTTCCACCATTTGTTCTTAAATGTCCAAATCTTGTGTCTCTTGCTCTTTCAATGAATACTATTGGGAAAGTTCCAGTTCAATTGTTCAACAGTCTCAAGAACCTAACAACCCTTGACCTTACACAAATCCAATTAGAGGGTCCAATTCCAACAGATATTAAGAATCTTTCAAAGCTTAAACACCTTGGTCTTGGAATCAACCAACTAAATGGTACAATTCCAAAGGAGATAGGTCTATTATCATCACTTGAGATTCTTGAACTGCATGAAAATTCCTTCCAAGGACCAATACCATCCACAATTGGAAATCTCACAATGCTTCAGAGACTTGATCTTCACAGCTCAGGGATAAATGCTAGCATCCCAGATGAAATAGGCTTCTGCACAAACCTTACTTTTATCGATATGTCCGGAAATAACCTCACAGGTTCCTTACCTCTTTCAATGGCTTCACTAACAAGAATCAAAGAGATGGGAATATCTGCTAACTATCTATCTGGAGAACTTCATCCATCTCTTCTTTCCAATTGGACAGAAATCAGCTCCTTGCAACTCCAAATGAATTATTTGTCAGGAAAACTTCATCCTGAGCTTGGTTTGCTTCAAAATCTTACTCTCTTGTTCCTCTACTCCAACCGGTTTTCTGGACCAATTCCACCAGAGATTGGAAACTTATCAAGCATAGAAGATCTTGAACTTTCTGACAACAATTTCAATGGTTCTATACCATCAACCATTGGAAAGTTGCAGAGCCTCACCCAGCTAACACTGGCCACAAACCAACTCAGTGGAATCCTTCCTCCTGAAATAGGTGATTTGGAAAGTCTTCAATCCCTTGACTTGAGTGGAAACAACCTTGCAGGGTCTTTGCCATCATCAATAGTTCGTTTGGAAAACCTCAACCTCCTTTATCTTCACAACAACAATTTCTCAGGAAGCATTCCACAAGATCTTGCACCTCCTTTCTTAACCAATTTGACCTTTTCCAACAATAGTTTCTCCGGGAAGCTACCTTCAGGAGTATGCAGGGGAGGGAACCTTGTCTACTTAGCTGCCAATCAGAACAATCTAGAAGGTCCAATCCCAGAAAGCCTGAGAAACTGCACTGGACTAGTCAGAGTTCGTCTTGAGAAGAACTCTCTTAGTGGAGATATCACGAATGCATTCGGCATATACCCGAATCTGAGCTTCATTGATTTAGGACAAAATCAGCTTACTGGTTCATTGACAAATAACTGGGGAGAGTGCAAAAATCTCTCAAGCTTTAGCATATCTTCCAATAAGATTCAAGGGAACATCCCTCCTGAGCTTGGAAGTTTGCCAAAGCTGCAAAATCTTGATCTCTCAAACAACAATCTAACAGGAAGCATCCCAGTGAAGCTCTTCAGTCCATCTTCCCAGCTGCTTAAACTAAACATGAGCAACAATAATCTCTCGGGTCAGTTACCGACCAGCATTGGAGCACTTTCACAGCTGCAATTTCTGGATTTATCAGCAAACAATATGAGAGGGTCAATTCCAAAAGAACTTGGAAACTGCAGAAAGCTTATATCACTGAAGCTGAGTATGAACCAGTTAGATGGCAATATGCCAATTGAGCTTGGGAATTTAGTGGAGTTGCAGCCTCTGTTGGATCTCAGCCATAACTCACTAAGTGGACAGATAATCACAGAGCTAGGAAATCTGATAGCCTTGGAAATTTTGAACCTTTCCCATAATCAGCTTTCTGGGACAGTTCCTTCTGCTTTGGAAGGACTAATAAGCCTTCAGTCAGTGGATATTTCTTATAACAAACTTGTAGGTCCCCTCCCGGACCTAGCTGCTTTTCAAAATGCTTCATCCGAAGCTCTAGCCGGCAATGCAGGTTTGTGTGCTGGTACTGCTAGCAATAGCAAAGCAAATTTGATTCCTTGTGTTGGAAGCAAAAGCAGCAAATCAAATAAACATAAGGTGGTCATTGCAGTAGTCATTCCACTTGCTGTTCTATTCATTTTATTAGTTTCCCTTGGAGTCTTCGCCTTGCTGCGCTACAAGAGAGTCGATCAAGAAGAAGAGGACAAGAGTGAAGAAGGAAAGGACTCACTCTTTGTATGGAATCACAGGAGCATAGTAGAGTTTAAGGACATTCGCAAGGCGACTGAGAATTTTGGTGACAAGTACTGCATAGGCATAGGAGGACAGGGAAGTGTCTACAAAGCAGTGCTTCCAACAGGTGATATCTTCGCAGTGAAGCGTCTCCACCAAATTGAGGATATAGACTTCTCCGGACACCAGACAAAGAATTTCATGTCTGAAGTTCATGCCTTAACCAATATTCGCCACAGAAACATTGTAACAATGTGTGGTTTTAGTTACTCGGACGGGTTTATATTTTTCATATATGAGCATGTGGAGAGAGGATCATTGCAGAAGTTGTTGCAGGACGACGAGGAGGCGAAGATGTTGACCTGGAATATCAGGCTGCAGATAATAAAAGGACTTGCAAATGCATTGTCTTACTTGCACCATGATTGCAAGCCCAGCATTGTTCATAGAGACATAACAGGGAACAATATTCTCTTGGACATTGATTATGAGCCTAAACTATCTGATTTTGGGACAGCAAGGTTGCTGAAAGAAGAAGAATCAAATTGGACAGCTCCTGCCGGATCATACGGCTATATAGCACCAGAGCTTGCATTTACCATGAAAGTGACCGAAAAATGTGATGTATATAGTTTCGGAATTGTTGCACTAGAGATTTTGGCAGGGAAGTACCCTCATGAACTACTTTCGTGTCTAGAATCTGGGGGATTTGATCAACACCTTGTGGATTTTTTAGATAAGAGAATTGATCCTCCAACAAGAAATTCTGTTCAACTCCTGGTATTGGTGGCAAGGATGATTCTAAAATGTGTTGATAAAGATCCTATGGCAAGACCCACCATGCACCAAGTATGCCAAGAGTTTTCTTCATCTTCTGATTACTCATCCTCTAACCCGTTGAGAATGATCAAATTGAAAAATTTAATAGACATGTAA 3597 0.4037 MTVLVFSSTLAQISAQKEAESLMRWMKSLNSPMLSSWNITNNNTSPCNWKGIKCNNGGSVVDIKLPNSGLDGTLNRFDFSSFPNLTTLNLTMNNLVGKIPSEIGNLTKLQVLDLSSNNFTYQMPPKIGNLLELQVLILSNNSLLQQIPYELSNLQNLRILELGGNFLSNPDPKFKGMTSLTDLNLTYNSLTEFPPFVLKCPNLVSLALSMNTIGKVPVQLFNSLKNLTTLDLTQIQLEGPIPTDIKNLSKLKHLGLGINQLNGTIPKEIGLLSSLEILELHENSFQGPIPSTIGNLTMLQRLDLHSSGINASIPDEIGFCTNLTFIDMSGNNLTGSLPLSMASLTRIKEMGISANYLSGELHPSLLSNWTEISSLQLQMNYLSGKLHPELGLLQNLTLLFLYSNRFSGPIPPEIGNLSSIEDLELSDNNFNGSIPSTIGKLQSLTQLTLATNQLSGILPPEIGDLESLQSLDLSGNNLAGSLPSSIVRLENLNLLYLHNNNFSGSIPQDLAPPFLTNLTFSNNSFSGKLPSGVCRGGNLVYLAANQNNLEGPIPESLRNCTGLVRVRLEKNSLSGDITNAFGIYPNLSFIDLGQNQLTGSLTNNWGECKNLSSFSISSNKIQGNIPPELGSLPKLQNLDLSNNNLTGSIPVKLFSPSSQLLKLNMSNNNLSGQLPTSIGALSQLQFLDLSANNMRGSIPKELGNCRKLISLKLSMNQLDGNMPIELGNLVELQPLLDLSHNSLSGQIITELGNLIALEILNLSHNQLSGTVPSALEGLISLQSVDISYNKLVGPLPDLAAFQNASSEALAGNAGLCAGTASNSKANLIPCVGSKSSKSNKHKVVIAVVIPLAVLFILLVSLGVFALLRYKRVDQEEEDKSEEGKDSLFVWNHRSIVEFKDIRKATENFGDKYCIGIGGQGSVYKAVLPTGDIFAVKRLHQIEDIDFSGHQTKNFMSEVHALTNIRHRNIVTMCGFSYSDGFIFFIYEHVERGSLQKLLQDDEEAKMLTWNIRLQIIKGLANALSYLHHDCKPSIVHRDITGNNILLDIDYEPKLSDFGTARLLKEEESNWTAPAGSYGYIAPELAFTMKVTEKCDVYSFGIVALEILAGKYPHELLSCLESGGFDQHLVDFLDKRIDPPTRNSVQLLVLVARMILKCVDKDPMARPTMHQVCQEFSSSSDYSSSNPLRMIKLKNLIDM 1198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00095 1198 Pfam Leucine rich repeat 201 261 IPR001611 GO:0005515
Arst6g00095 1198 Pfam Leucine rich repeat 633 693 IPR001611 GO:0005515
Arst6g00095 1198 Pfam Leucine rich repeat 420 478 IPR001611 GO:0005515
Arst6g00095 1198 Gene3D Transferase(Phosphotransferase) domain 1 989 1190 - -
Arst6g00095 1198 SMART LRR_sd22_2 106 132 - -
Arst6g00095 1198 SMART LRR_sd22_2 154 185 - -
Arst6g00095 1198 SMART LRR_sd22_2 393 425 - -
Arst6g00095 1198 SMART LRR_sd22_2 608 640 - -
Arst6g00095 1198 SMART LRR_sd22_2 681 702 - -
Arst6g00095 1198 SMART LRR_sd22_2 465 494 - -
Arst6g00095 1198 SMART LRR_sd22_2 224 250 - -
Arst6g00095 1198 SMART LRR_sd22_2 320 341 - -
Arst6g00095 1198 Gene3D Ribonuclease Inhibitor 170 319 IPR032675 -
Arst6g00095 1198 FunFam Leucine-rich repeat receptor-like protein kinase 989 1185 - -
Arst6g00095 1198 PRINTS Leucine-rich repeat signature 635 648 - -
Arst6g00095 1198 PRINTS Leucine-rich repeat signature 754 767 - -
Arst6g00095 1198 Gene3D Ribonuclease Inhibitor 14 169 IPR032675 -
Arst6g00095 1198 FunFam Leucine-rich repeat receptor protein kinase MSP1 871 988 - -
Arst6g00095 1198 FunFam Leucine-rich receptor-like protein kinase family protein 265 363 - -
Arst6g00095 1198 SUPERFAMILY Protein kinase-like (PK-like) 888 1173 IPR011009 -
Arst6g00095 1198 Gene3D Phosphorylase Kinase; domain 1 869 988 - -
Arst6g00095 1198 Pfam Protein kinase domain 913 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00095 1198 Gene3D Ribonuclease Inhibitor 320 512 IPR032675 -
Arst6g00095 1198 Gene3D Ribonuclease Inhibitor 513 826 IPR032675 -
Arst6g00095 1198 FunFam Nuclear pore complex protein NUP107 15 173 - -
Arst6g00095 1198 SUPERFAMILY L domain-like 567 816 - -
Arst6g00095 1198 Pfam Leucine Rich Repeat 757 778 IPR001611 GO:0005515
Arst6g00095 1198 ProSiteProfiles Protein kinase domain profile. 908 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00095 1198 SMART serkin_6 908 1176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00095 1198 SUPERFAMILY L domain-like 362 650 - -
Arst6g00095 1198 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1034 1046 IPR008266 GO:0004672|GO:0006468
Arst6g00095 1198 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 272 366 - -
Arst6g00095 1198 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 272 366 - -
Arst6g00095 1198 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 513 827 - -
Arst6g00095 1198 ProSiteProfiles Leucine-rich repeat profile. 634 656 IPR001611 GO:0005515
Arst6g00095 1198 Pfam Leucine rich repeat N-terminal domain 16 55 IPR013210 -
Arst6g00095 1198 SUPERFAMILY L domain-like 32 359 - -
Arst6g00095 1198 FunFam Leucine-rich repeat receptor protein kinase EMS1 410 509 - -
Arst6g00095 1198 SMART LRR_typ_2 296 320 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 201 223 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 106 129 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 754 777 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 154 176 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 441 464 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 632 656 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 681 705 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 130 153 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 177 200 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 393 417 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 465 489 IPR003591 -
Arst6g00095 1198 SMART LRR_typ_2 248 272 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00095 Arst-Chr6 945576 952305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00095 4 650 Receptor kinase-like Gene Family AT4G08850 31.957 4.18e-89 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst6g00095 Pkinase 5.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00095 - - ccaj:109803789 1606.27