Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00094 ATGACAACCTTCCAACAAACACATTCTATTGTCTTTCTGGTATTTCTTGTATCTCTACTTACAATAAATACCTCAGTCACAGCATCACCAATAACAGAAGCACAAGAACTTGTTAAATGGAAAAATACTCTATCCCTTCCTCTTCCTTCTTCACTCAAATCATGGTCACTCAACAACTTTGACAAACTTTGCAGTTGGGAAGCCATTCTTTGTGACAAAACAAACACAACAATCACACACATAAACCTCTCTGATTTCTACCTAAATGGTACTCTTGATTCCTTGGCTTTTTCTTCTCTTCCAAACCTCACTTATTTCAACCTCAACGGCAACAACTTCAATGGATCATTGCCATCTTCCATTGGAAGACTCTCCAAGCTCACTTTCTTAGACTTGGGAAACAATTATTTTGCAGACACTTTGCCTTCAGAGCTAGGCCAGTTAAAGGAACTTCAATATCTCAGTTTTCACAACAACAATTTCATTGGCACCATTCCCTATCATCTCACAAGTCTCCCCAAGGTATGGTACCTTGACTTTGGATCAAACTACTTTGAATCTCAAAACTGGTCTCAATATTCATGCTTGCCTTCACTAACACACCTTGACTTGGATCTCAATTCATTCACCCCTGAATTTCCAAGTTTTGTGCTGAAGTGCCACAACTTAACTTTCCTTGACCTCTCCCAAAACACTTTCAATGCCACAATACCAGAATCCATGTTCACCAATTTGAACAAGCTTGAGTACCTTAACCTCACAAACTGTGGTATGCAAGGACCACTATCTTCCAATTTGTCCAAGCTCTCAAATCTCAAAGAACTTCGAATGGGAAACAACATGTTTACTGGTCCTATTCCAGAAAACATAGGATTGATATCTGGCCTTCAGTTTCTTGAATTGAATAACATTTCAGCCCATGGGGCAATCCCTGCATCCTTAGGCCAACTCAAAGAACTCCAGCATCTTGATCTTAGCACTAACTTTTTGAATTCTTCAATCCCTTTTGAACTTGGCCTATGCAGCAATCTAACTTTTCTTGCTTTAGCAGGCAATACTTTGACTGGTTCTTTACCTTTATCATTATCCAATCTGACCAAACTTTTACATTTGGGATTATCTGAAAATTCTTTTTCTGGTCAAATTTCTGCTTCATTGATCTCAAACTGGACCAAGTTGATATCTCTGCAACTCCAAAACAATAATTTAACAGGAAGAGTTCCTCCAGAAATTGGCTTGCTCACAAAAATCAATTACCTTTTCTTGTACAATAACACAATGTCAGGTCCAATACCTGTGGAGATTGGAAACCTGAAGGAAATGATACAATTAGACCTTTCAGATAACCATTTCTCTGGTAAGATTCCTCTAACTATTTGGAATCTTACAAATATTACAATCTTGAACCTTTTCTTCAATGAGTTATCAGGGACTATTCCCAAGGATATTGGAAACTTAAAATCACTACAATATTTTGATGTCAACAACAACAAATTAAGTGGAGAGTTACCAGATACCATAGCTCAACTGCCTGCTCTGGTGCATTTTTCTGTGTTTAGCAATAAATTCTGGGGTAACATTACTCAAGAATTTGGAAAGTATAGTCCTAATTTGGATACAATCTACCTTTCAAACAACAGTTTCTCAGGAGAATTGCCACCTGACTTGTGTAATGGTACTGTGTTAACTATTTTGGCAGCCAATAACAACAGTTTTTCTGGATCTTTGCCAAAGTCTTTGAGAAATTGTTCAAGACTAGTTAAACTTCGGCTTGATGTTAATCAATTCTCTGGTAACATCACAGAAGCATTTGGGGTTTATCCAAGTCTTGAGTTTATCTCACTCAGTGAAAATCTTCTTGTTGGTGAGCTATCTCCAAAGTGGGGTGAATGTGTCAACCTGACCAGGATGGAAATGAGTAAAAATAAACTTTCAGGAACAATCCCCTCTGAGTTGAGTAAGCTGAATGAACTGGCATATCTGCGTTTGGACTCCAATGAATTCACAGGCAATATCCCACCTGAAATGGGAAAACTAACCAAGCTCTTTATGTTGAACATGAGCAAGAATCATATGTCTGGAGAAGTCCCTCAAAGTATTGGCAGTTTGGCTAATCTTAATTTTCTTGATTTTTCAGACAACAATTTTATTGGAAGCATTCCTAAAGAGCTTGGTAATCTTCAAAGATTAGTAAGCCTGAATTTAAGCCATAACAATCAATCAGGGGAGATACCATCTGAACTTGGCAATCTGTTATCACTCCAGATCCTCTTGGATCTCAGCAGCAACTCTCTTACAGAAGAAATTCCTCAGAACTTTGAAAAGCTTGCAAAATTGGAGGTTCTCAATGTCTCACACAACTATTTATCTAGCCGAATCCCAGAGTCTTTGGACAACATGCTCAGCCTTGATTCCGTTGACTTTTCTTACAATAACTTGACTGGTCCAATCCCAAGTGATGGTATTTTCCAAACAGCAAATGCTAAATATGAAGGAAACCCAGGTTTGTGTGGTGAGGTAAAAGGTTTACATCCATGCATTACAAACAGAAACAAATCTGGAGGAGTTAACAAAAGGGTCCTTCTTGGTGTTCTTATACCAATTTGTGGATTACTATTGGGACTGATATGTGTTGCAATCCTTGTATGGCGACAACACCCCAAACTCAATGACGAAGAGTCCGAAAGCACTCAAACTAGTGATAAAGCTCTTAGCATTGTGTGGGGAAGGGATGGACAATTCACATTCTCTGAACTTGCCAAGGCCACTGATGAGTTCAATGATAGATATTGCATTGGAAAGGGAGGATTTGGAAGTGTTTACAAAGCAGAATTAGGCACAGGTCAAGTTGTTGCTGTCAAAAGACTCAATATCTCGGACTCTAATGACATTTCACCAGTAAACCGGCGGAGCTTTGAGAATGAGATAAGAACACTGACAGGTGTGAGACACCGGAACATAATCAAGCTATATGGTTTTTGCTCAAGGAGGAAACAGATGTTCTTGGTTTATGAATATGTAGAGAAAGGAAGCTTGAGAAAAGTGCTGTATGGAGAGGAAGGAATATTGGAGCTAAGTTGGAAGAAGAGGATGAAAGTTGTGCAGGGAATAGCACATGCACTTGCCTACTTACACACTGATTGCTATCCACCAGTTGTGCACAGAGATGTAACAATGAATAACATATTATTAGACTTGGACTTTGAACCTCGTCTTGCAGATTTCGGCACTGCAAAGCTTTTAAGCTCTGAGGCTTCAACATGGACCTCAGTGGCTGGTTCTTATGGCTACATGGCTCCAGAACTAGCCCAAACAATGAGGATCAGTGACAAGTGTGATGTGTATAGTTTCGGAGTGGTGGTGTTGGAGATAATAATGGGAAAACACCCTGGAGAACTGTTGACAAACATGTCCTTGTCATGCATGGAAGATTCAGAGGTGCTTCTGAGGGATGTGTTAGACCAGAGGCTGCCACCTCCAACAGGGGAATTAGCTGAGGCAGTGGTGTTCACAGTGAGCATAGCTTTGGCATGCACACGTTTGGCTCCAGAGTCCAGACCCACAATGCGTTCTGTGGCACAAGACCTATCAGCTACTACACAGGCTTGTCTTTTGGAGCCATTTGAGATGATAACAATGAGCAAGCTTACAGGTTTCAAAAATAATAACTAG 3672 0.3968 MTTFQQTHSIVFLVFLVSLLTINTSVTASPITEAQELVKWKNTLSLPLPSSLKSWSLNNFDKLCSWEAILCDKTNTTITHINLSDFYLNGTLDSLAFSSLPNLTYFNLNGNNFNGSLPSSIGRLSKLTFLDLGNNYFADTLPSELGQLKELQYLSFHNNNFIGTIPYHLTSLPKVWYLDFGSNYFESQNWSQYSCLPSLTHLDLDLNSFTPEFPSFVLKCHNLTFLDLSQNTFNATIPESMFTNLNKLEYLNLTNCGMQGPLSSNLSKLSNLKELRMGNNMFTGPIPENIGLISGLQFLELNNISAHGAIPASLGQLKELQHLDLSTNFLNSSIPFELGLCSNLTFLALAGNTLTGSLPLSLSNLTKLLHLGLSENSFSGQISASLISNWTKLISLQLQNNNLTGRVPPEIGLLTKINYLFLYNNTMSGPIPVEIGNLKEMIQLDLSDNHFSGKIPLTIWNLTNITILNLFFNELSGTIPKDIGNLKSLQYFDVNNNKLSGELPDTIAQLPALVHFSVFSNKFWGNITQEFGKYSPNLDTIYLSNNSFSGELPPDLCNGTVLTILAANNNSFSGSLPKSLRNCSRLVKLRLDVNQFSGNITEAFGVYPSLEFISLSENLLVGELSPKWGECVNLTRMEMSKNKLSGTIPSELSKLNELAYLRLDSNEFTGNIPPEMGKLTKLFMLNMSKNHMSGEVPQSIGSLANLNFLDFSDNNFIGSIPKELGNLQRLVSLNLSHNNQSGEIPSELGNLLSLQILLDLSSNSLTEEIPQNFEKLAKLEVLNVSHNYLSSRIPESLDNMLSLDSVDFSYNNLTGPIPSDGIFQTANAKYEGNPGLCGEVKGLHPCITNRNKSGGVNKRVLLGVLIPICGLLLGLICVAILVWRQHPKLNDEESESTQTSDKALSIVWGRDGQFTFSELAKATDEFNDRYCIGKGGFGSVYKAELGTGQVVAVKRLNISDSNDISPVNRRSFENEIRTLTGVRHRNIIKLYGFCSRRKQMFLVYEYVEKGSLRKVLYGEEGILELSWKKRMKVVQGIAHALAYLHTDCYPPVVHRDVTMNNILLDLDFEPRLADFGTAKLLSSEASTWTSVAGSYGYMAPELAQTMRISDKCDVYSFGVVVLEIIMGKHPGELLTNMSLSCMEDSEVLLRDVLDQRLPPPTGELAEAVVFTVSIALACTRLAPESRPTMRSVAQDLSATTQACLLEPFEMITMSKLTGFKNNN 1223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00094 1223 ProSiteProfiles Protein kinase domain profile. 926 1209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00094 1223 PANTHER LEUCINE RICH REPEAT KINASE 2 461 1200 - -
Arst6g00094 1223 PANTHER LEUCINE RICH REPEAT KINASE 2 461 1200 - -
Arst6g00094 1223 ProSitePatterns Protein kinases ATP-binding region signature. 932 954 IPR017441 GO:0005524
Arst6g00094 1223 SUPERFAMILY Protein kinase-like (PK-like) 909 1196 IPR011009 -
Arst6g00094 1223 Gene3D Ribonuclease Inhibitor 388 513 IPR032675 -
Arst6g00094 1223 SMART LRR_typ_2 221 244 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 196 220 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 655 679 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 317 341 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 486 510 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 365 389 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 703 727 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 751 775 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 124 148 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 536 559 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 269 293 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 100 123 IPR003591 -
Arst6g00094 1223 SMART LRR_typ_2 776 800 IPR003591 -
Arst6g00094 1223 FunFam MDIS1-interacting receptor like kinase 2 194 387 - -
Arst6g00094 1223 SUPERFAMILY L domain-like 341 527 - -
Arst6g00094 1223 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 535 850 - -
Arst6g00094 1223 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1052 1064 IPR008266 GO:0004672|GO:0006468
Arst6g00094 1223 Pfam Leucine rich repeat 758 813 IPR001611 GO:0005515
Arst6g00094 1223 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Arst6g00094 1223 Gene3D Phosphorylase Kinase; domain 1 888 1006 - -
Arst6g00094 1223 SUPERFAMILY L domain-like 535 826 - -
Arst6g00094 1223 FunFam MDIS1-interacting receptor like kinase 2 1007 1202 - -
Arst6g00094 1223 FunFam Leucine-rich repeat receptor protein kinase MSP1 889 1006 - -
Arst6g00094 1223 CDD STKc_IRAK 932 1196 - -
Arst6g00094 1223 Gene3D Transferase(Phosphotransferase) domain 1 1007 1206 - -
Arst6g00094 1223 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 433 531 - -
Arst6g00094 1223 SUPERFAMILY RNI-like 80 404 - -
Arst6g00094 1223 Gene3D Ribonuclease Inhibitor 191 387 IPR032675 -
Arst6g00094 1223 Gene3D Ribonuclease Inhibitor 514 849 IPR032675 -
Arst6g00094 1223 Pfam Protein kinase domain 931 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00094 1223 FunFam Nuclear pore complex protein NUP107 31 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00094 Arst-Chr6 916434 920571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00094 1 671 Receptor kinase-like Gene Family AT4G08850 30.758 6.24e-78 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Arst6g00094 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00094 - - gmx:100809137 1640.17