Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00087 ATGGCGCCAAATCCAAAGGTGGTAGCAGCCTATCGTGCAATGGCAAATCTTGGGATTCATGAATCAAAAGTGAAGCCAGTACTAAAGAAGCTCCTTAAGTTGTATGATAAAAACTGGGAGCTTATTGAAGAAGAGAACTATAGAGCTCTGGCAGATGCAATATTTGAGGAGGAGGAAAATCCGGTGCCGGAGCAAGAGCAGGAAAAGAAAAACAAGAGAGTTGATGAAGCAGAGTTAGATGATGAAGTGCAAGATCAGCCACTGCGACCTAAAAAGAGGTTGCGCTTGAGAGGTCCAGAGTTTCAGTCTTCAAATAATCAGATTAGCTGTGGTCCCAGTTCAGCTGCTTTTCCATCGAAAACTCCTAAATTAGAAGATGACACAGTACCTGGAAATGGTTCTATACTGCATGCTCAAAGTGCTGCAGCATTATCTGATGGAAATGGAATGATTGAAGCTCATCAAGTTCATTCACAAGATGACATTATTGACAAGGGAAAGAAACCTGTATCACCTCAAGTTACTCCCAGAGGAAGAAGATCTACATCGGATGGAGTGCCACCAGCAGTACTACCTAAAGAACCAGCAGTTGAACCGCTGAGCACTTTGTCTCCAAGAAGCAAAATGGCCCATCCTCTTGTATGGATCAAGCCCAAGGACGAGCCAATTGATGACGCACGAGATAATGAGGCTCCCATTTCAATGATTCTTCCTGAACCATCTAGTGGAAAGGATTCTTCAATGATGAATGGTGCAGCTGGACAGCAAGATTGTGACGACACTGTGGCATCACATTGCTTAAATGATGAAGTTGCTGGTGAAGATAACCTTCGCTCTTCAAATGAAGATGCCCCTTCTACTGTAGAGATAGGCTCATCACCTGTACAAGAGGAAGGATCTGCAAAGATAACACCAAACATCAGCATGCCAAAGGAATCTGAGTCACATGATGCTCTGGTTGCCGGAGGAAATGAAGATCCAGTTACACCTTGCATTTCAAATGGATCTGCCAATGTTAATTCTCATTCTTCCTTGCCCAATACTGAAATTCCAGTATCTCTGCCCTGCTCGTGTGGTCTGGATGACACTTCACCAGTTCCCCAGGAGGTTGGAAATAATGATTGCTTAGCAAGTGATGATGGAAGGGAGCTAGTGGATCCTATATCTAATAATTCTCATAGCTTAGTTACTGTTCCAAAGAATCAGCTTACTACTAATGCTATAATGACTGTTCACGATGTTAATGACATATCAAAGGGTGAAGAAAAAGTGAAAATTTCATGGGTCAATAACATTACTGATGATTTCCCACCATCCTTTCATTACATACCCCGAAACCTTGTATTCCAAAATGCTTATGTTAGTATTTCTCTGTCTCGTATTGGGAATGAAGATTGCTGTTCTACTTGCATAGGCAATTGTGTCTTGTCTTCTGAATCATGTTCTTGTGCGAATAAAACTGGTGGTGGATTTGCCTACACTGCACAAGGCCTACTGAAGGAAGAGTTTTTGGATGAGTGCATTGTCATCAGCTGCAACCCTAAAAATTGTTTCTATTGTGAAGACTGCCCAGTTGAAAGATCAAAGAATGATGATTGTTCAGAACCATGTAAAGGACACTTAAGGAGGAAGTTTATTAAGGAATGCTGGAGTAAATGTGGCTGTGGTAAAAAATGTGGCAATCGGGTTGTCCAGCGAGGAATAACTTGCAACTTGCAGGTGTTTTTAACTTCTGAAGGAAAAGGTTGGGGTCTTCGGACGTTAGAGGACCTTCCCAAAGGGGCATTTGTGTGTGAGTTTGTTGGAGAAATTCTAACCGTCAAAGAATTGCATGAGAGGAGCCTAAAATATCCCAAAAATAGGAAATATACATACCCAATTCTATTGGATGCAGATTGGGAATCAGGAGGTGTGGGGGATAAAGAAGCACTTTGCTTGTATGCAGCATCTTATGGAAATGCTGCTAGGTTTATTAATCACAGATGTTTAGATGCTAACTTGATTGAGATCCCCGTTGAAATTGAGGGCCCAGATCATCACTACTATCATCTTGCCTTATTCACATCCAGAGAAATAGCAGCACAGGAGGAGCTCACTTGGGATTATGGCATCAACTTCGATGATCATGATCAGCCTGTTGAGCTGTTTGGGTGCAAATGTGGAAGTAAATTCTGCAGGAATATGAAGCGATCAAGTAGATCCGCAAGATCGTTGGCTGCAAGATGA 2226 0.4218 MAPNPKVVAAYRAMANLGIHESKVKPVLKKLLKLYDKNWELIEEENYRALADAIFEEEENPVPEQEQEKKNKRVDEAELDDEVQDQPLRPKKRLRLRGPEFQSSNNQISCGPSSAAFPSKTPKLEDDTVPGNGSILHAQSAAALSDGNGMIEAHQVHSQDDIIDKGKKPVSPQVTPRGRRSTSDGVPPAVLPKEPAVEPLSTLSPRSKMAHPLVWIKPKDEPIDDARDNEAPISMILPEPSSGKDSSMMNGAAGQQDCDDTVASHCLNDEVAGEDNLRSSNEDAPSTVEIGSSPVQEEGSAKITPNISMPKESESHDALVAGGNEDPVTPCISNGSANVNSHSSLPNTEIPVSLPCSCGLDDTSPVPQEVGNNDCLASDDGRELVDPISNNSHSLVTVPKNQLTTNAIMTVHDVNDISKGEEKVKISWVNNITDDFPPSFHYIPRNLVFQNAYVSISLSRIGNEDCCSTCIGNCVLSSESCSCANKTGGGFAYTAQGLLKEEFLDECIVISCNPKNCFYCEDCPVERSKNDDCSEPCKGHLRRKFIKECWSKCGCGKKCGNRVVQRGITCNLQVFLTSEGKGWGLRTLEDLPKGAFVCEFVGEILTVKELHERSLKYPKNRKYTYPILLDADWESGGVGDKEALCLYAASYGNAARFINHRCLDANLIEIPVEIEGPDHHYYHLALFTSREIAAQEELTWDYGINFDDHDQPVELFGCKCGSKFCRNMKRSSRSARSLAAR 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00087 741 Gene3D - 1 60 IPR043017 -
Arst6g00087 741 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 741 IPR025776 -
Arst6g00087 741 Pfam SET domain 582 703 IPR001214 GO:0005515
Arst6g00087 741 ProSiteProfiles SET domain profile. 570 703 IPR001214 GO:0005515
Arst6g00087 741 MobiDBLite consensus disorder prediction 63 98 - -
Arst6g00087 741 MobiDBLite consensus disorder prediction 99 116 - -
Arst6g00087 741 SUPERFAMILY SET domain 424 726 IPR046341 -
Arst6g00087 741 MobiDBLite consensus disorder prediction 279 309 - -
Arst6g00087 741 SMART set_7 570 709 IPR001214 GO:0005515
Arst6g00087 741 SMART preset_2 414 554 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst6g00087 741 MobiDBLite consensus disorder prediction 274 309 - -
Arst6g00087 741 ProSiteProfiles Pre-SET domain profile. 466 567 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Arst6g00087 741 MobiDBLite consensus disorder prediction 158 196 - -
Arst6g00087 741 MobiDBLite consensus disorder prediction 57 128 - -
Arst6g00087 741 Gene3D SET domain 396 523 IPR046341 -
Arst6g00087 741 CDD SET_SETDB-like 438 703 - -
Arst6g00087 741 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Arst6g00087 741 Gene3D SET domain 524 707 IPR046341 -
Arst6g00087 741 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 736 - -
Arst6g00087 741 Pfam Pre-SET motif 417 562 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00087 Arst-Chr6 874561 882453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00087 416 726 Su(var)3-9 homologs AT1G73100 30.091 1.08e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst6g00087 Pre-SET 2.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00087 - - gmx:100788602 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00087 6 874561 882453 Arst6g00087 6 874561 882453 ECH
Arst1g00107 1 1039060 1048529 Arst6g00087 6 874561 882453 PCT
Arst6g00087 6 874561 882453 Arst6g00087 6 874561 882453 PCT