Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00050 ATGCTCTTCCTTCTGGTTCTGCTTGCTGCTGCGGCGTCCACCATGATCGCCGCCGGCCGTCTCGCCGGAATTCTGCTGTTTTCTTCTCCTGACGATGCTTCTCACCGCTTTCGAGTTCGCCGAGAGAGAATGCCGGCGTCAGTTTTCTTCCTCCTCGTTCTTCTCAACTTGCTACTATCTTGCTCAGTGAAGTCGGTTTCTGTGAGTGTTTCATATGTCTCATCAGAACGAGCTAAAACTTGGTTAGTTAAACCTTCTTCTGGACCATCTACTTCACCTGGACCTGCTGCCCCTGTACCTGCACCATCTCCATCATATCAAGGTCCTATTGTGCATCCAAGTCCAAAACATCGCTATCATCATCATCATCACCATCATAGCGTAAAACCTTATCCAGTCGCTCCACCCCCTTCTAAAGACCAAGGTTGCGACCAAATCTGTACGGATCCACTCACATCAACACCTTTTGGGTCACCTTGTGGTTGTGTATTTCCCATGAAAGTCAGACTCACGCTGGGTGTAGCTCCTTATGCTGTCTTTCCAGTAATGAATGAATTAGAGATTGAAGTTGCATTAGGCACATACTTAGAGCAGAGTCAGGTGAAGATAATGGGTGCTAGTGCTGATAGTGAGAATCAGGGAAGAACTGTAGTTGATATAAACTTGGTTCCATTGGGAGAGAAATTTGACAATACTACTGCAGCTCTGACATATGAGAGGTTCTGGCACAAGAAAGTCCCACTCAATAGAAGCCTTTTTGGTGATTATGATGTTTTGTACATTGCCTATCCAGGAATTTCTTCATCGCCACCGTATGCATATGGAACCATAGCTGGGGATGCTCCTATGGAAAGTGTAACTGGTAGTCTACCAGTCTCTGCCAACTTTGTCAACAAGAATCAGAGAATGAATCTCAGAACCATAATCATCATTGCTTCGTCTTCCTTTGTACTTTTATTGGTTTTAGTTGGAGCAGTTTCTATCATTTTGAAATGTCAGAAGATTAGGAGGCCATCGAGTGCCGTTGGCCCTGCATTCACTTCATCTCTAAACAAGAGATCTGGCTTGGGTTCTATGTTGTCAAGCAGTATTACAAGCTCGACGTCAGTGTCCCTTATGTCCACAATGGCTGCTTCCATTCTCTCTGTTAAAACATTTTCGCTTTCTGAGCTCGAGAAAGCTACGGATAAGTTTAGTTCAAAGAGAGTATTAGGAGAAGGAGGATTTGGACGAGTTTACAGTGGGACATTGGAAGATGGGGCTGAAGTTGCAGTTAAGCTGCTGACTAGAGATAATCAGAATGGAGATCGTGAATTTATTGCAGAAGTTGAAATGCTAAGCCGATTGCATCACCGGAATCTTGTTAAACTACTTGGTATATGTATCGAAGGGCGCCGACGTTGCTTGGTGTATGAGCTTGTTCACAATGGCAGTGTTGAGTCACACTTGCATGGTGTTGACAAGAAAAAGGGACCTCTAGATTGGGAAGCACGAATGAAAATTGCACTTGGAGCAGCAAGAGGTTTGGCATATCTTCATGAGGATTCTAATCCTCGTGTAATTCATCGAGATTTTAAAGCTAGCAATGTGCTACTAGAAGATGACTTTACCCCGAAGGTTTCTGATTTTGGATTGGCAAGAGAAGCAACTGAAGGAAGTCAGCATATTTCTACAAGGGTGATGGGAACTTTTGGGTACGTTGCCCCAGAATATGCGATGACAGGTCATTTACTCGTTAAAAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAACTTCTTACTGGCAGAAAGCCAGTGGACATGTCTCAACCTCAGGGACAGGAGAATCTAGTAACTTGGGCAAGACCATTGTTGGCGAGCAGGGAAGGTTTAGAACAGCTAGTGGATCCATCTTTGGCTGGAAGTTACGACTTTGATGACATGGCAAAGGTTGCTGCTATCGCCTCCATGTGCGTCCACCCAGAGGTCACACAGAGACCCTTCATGGGTGAAGTCGTGCAGGCTCTTAAGTTAATATACAATGATGCAGACGAGACTTGCGGAGATTACTGCAGTCAGAAGGACTCCTCCGTACAGGACTCTGATTTCAGAGGCGATCTCGCCCCTTCCGATAGCAGTTGGTGGAATGCCGGAGGGTTAACCCCTCGATTAACTTATGGGCAAGCATCATCTTTCATCACCATGGAGTACAGTTCTGGTCCACTTGATGATATGGAAAACAGACCGTTTTCGACTTCAAGCTTGATCGGAGATGAGATGTCTTTACCGATTAAGCATGGGAACAGATCAGGTCCGTTGAGAACAGTCCGAAGTAAGTTATCATTGCATAGATTTACAGGAAGCCGGAGTGAACACGGGGGACCTTCTTCTAAGCACCATTGGAACGATGGTTACTGGGCTTAA 2406 0.4518 MLFLLVLLAAAASTMIAAGRLAGILLFSSPDDASHRFRVRRERMPASVFFLLVLLNLLLSCSVKSVSVSVSYVSSERAKTWLVKPSSGPSTSPGPAAPVPAPSPSYQGPIVHPSPKHRYHHHHHHHSVKPYPVAPPPSKDQGCDQICTDPLTSTPFGSPCGCVFPMKVRLTLGVAPYAVFPVMNELEIEVALGTYLEQSQVKIMGASADSENQGRTVVDINLVPLGEKFDNTTAALTYERFWHKKVPLNRSLFGDYDVLYIAYPGISSSPPYAYGTIAGDAPMESVTGSLPVSANFVNKNQRMNLRTIIIIASSSFVLLLVLVGAVSIILKCQKIRRPSSAVGPAFTSSLNKRSGLGSMLSSSITSSTSVSLMSTMAASILSVKTFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLEDGAEVAVKLLTRDNQNGDREFIAEVEMLSRLHHRNLVKLLGICIEGRRRCLVYELVHNGSVESHLHGVDKKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPLLASREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDADETCGDYCSQKDSSVQDSDFRGDLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLDDMENRPFSTSSLIGDEMSLPIKHGNRSGPLRTVRSKLSLHRFTGSRSEHGGPSSKHHWNDGYWA 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00050 801 Gene3D Transferase(Phosphotransferase) domain 1 474 696 - -
Arst6g00050 801 MobiDBLite consensus disorder prediction 779 801 - -
Arst6g00050 801 Pfam Protein tyrosine and serine/threonine kinase 400 669 IPR001245 GO:0004672|GO:0006468
Arst6g00050 801 MobiDBLite consensus disorder prediction 83 139 - -
Arst6g00050 801 FunFam receptor-like serine/threonine-protein kinase ALE2 371 473 - -
Arst6g00050 801 PANTHER OS01G0750732 PROTEIN 136 692 - -
Arst6g00050 801 CDD STKc_IRAK 404 673 - -
Arst6g00050 801 ProSitePatterns Protein kinases ATP-binding region signature. 404 426 IPR017441 GO:0005524
Arst6g00050 801 Gene3D Phosphorylase Kinase; domain 1 369 473 - -
Arst6g00050 801 MobiDBLite consensus disorder prediction 114 129 - -
Arst6g00050 801 SUPERFAMILY Protein kinase-like (PK-like) 382 671 IPR011009 -
Arst6g00050 801 MobiDBLite consensus disorder prediction 91 109 - -
Arst6g00050 801 ProSiteProfiles Protein kinase domain profile. 398 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst6g00050 801 FunFam Receptor-like serine/threonine-protein kinase ALE2 474 691 - -
Arst6g00050 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00050 Arst-Chr6 617910 624213 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00050 146 790 Receptor kinase-like Gene Family AT5G56890 53.973 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Arst6g00050 PK_Tyr_Ser-Thr 6.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00050 - - gmx:100792309 1240.71