Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00042 ATGGTTGCTGCTACCACTCCTATAGTTGGGTCCCATGTTTGGGTTGAGGATTCTGAAGTAGCATGGATAGATGGTGAAGTCTTGGAGGTTAATGGAGAAGAAGTTAAAGTCTCTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGTGTCCTGTATTTATCATAAAGACACTGAAGTTCCGCCAAGTGGAGTAGACGATATGACAAAGCTTGCATACCTACACGAACCTGGTGTACTAGAAAATCTGAGATCAAGATATGATATCAATGAAATTTACACTTACACTGGAAATATATTGATTGCGGTGAACCCTTTTGTAAAGCTTCCTCATTTATATGATAGTCATATGATGGCACAATATAAAGGAGCAGTGTTTGGTGAGCTAAGTCCACATCCCTTTGCCGTTGCAGATGCTGCATATAGGCTTATGATAAATGAGGGAATCAGCCAGTCAATATTAGTCAGTGGTGAAAGCGGAGCTGGTAAAACAGAAAGTACTAAGTTGCTCATGCGGTATCTTGCCTACATGGGAGGGAGAGCTGCTGCTGAAGGTAGAACTGTTGAGCAAAAAGTCTTGGAGTCCAATCCTGTTCTTGAAGCCTTTGGGAATGCAAAGACGGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGATCAGAGGGGAAGAATTTCAGGAGCTGCTATCAGAACATATCTGCTGGAAAGATCGCGTGTTTGTCAGCTATCAGACCCAGAGAGGAATTATCACTGTTTCTACATGCTCTGCGCTGCACCGCAGGAGGAGATTATGAAGTACAAGTTAGGACATCCAAAAACATTTCATTATCTGAATCAATCAAATTGCTATGAGTTAGAAGGGATTGACGAACATAAAGAATATATAGCTACAAGGAGAGCAATGGATGTTGTTGGAATGAGTTTTGAGGAGCAGGATGCAATATTTCGAGTTGTTGCTGCAATTTTGCATCTTGGCAACATTGAGTTCATGAAAGGGAAGGAGATAGATTCATCTGCTCCAAAAGATGAGAAATCTCGGTTCCATCTACAGACTGCAGCTGAGCTTTTCATGTGTGATGCTAAGGCACTTGAAGATTCTCTTTGCAAACGAGTAATTGTTACTCGTGATGAAACAATTACAAAATGGCTGGATCCAGAAGCTGCTGCACTCAGCCGAGATGCTTTGGCTAAGATCGTTTATGCAAGGTTGTTTGACTGGTTGGTTGACAAGATTAATAGTTCAATTGGACAAGATACTGACTCAAAATCCTTAATTGGTGTGCTTGATATTTATGGTTTTGAGAGTTTCAATATCAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAGGAAGAGTACAAGAAAGAGGAGATCGATTGGAGTTACATTGAATTTGTCGACAATCAAGATATTCTAGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTTTGGATGAAGCTTGCATGTTTCCTAGATCAACACATGAAACTTTTGCTCAAAAGCTGTATCAGACCTTCAAAAACCATAAAAGGTTTAGCAAGCCCAAGTTATCGGTATGCACCATCAATATAAAAAAGTTTTACATTGTCATTCAATGATTGGATGTCACTTATCAAACTGATTTATTCCTCGACAAGAACAAAGATTATGTTGTAGCTGAACACCAAGCACTTCTTTATGCTTCTAAATGCCCCTTTGTATCGGGTTTGTTTCCACCTTCTCCTGAAGAATCATCCAAACAATCAAAGTTCTCTTCAATTGGTTCACGATTTAAGCAACAATTGCAATCCTTGCTTGAAACTCTCAGTTCCACTGAGCCACATTACATCCGTTGTGTGAAACCCAATAATTTTCTCAAGCCAGCAATTTTTGAGAATAAAAATGTCTTGCTGCAACTCCGTTGTGGGGGAGTTATGGAGGCAATTAGGATTAGCTGTGCTGGGTATCCCACTCGGAAAACCTTTGATGAATTTGTGGATCGATTTGGCCTTCTTGCACCTGATGCTTTGGTCGGAAGCTCTGATGAAGTTCAAGCTTGCAAGAGGATTCTGGAGAATGTTGGACTTGAAGGCTATCAGATTGGTAAAACAAAGGTTTTTCTTCGAGCTGGTCAAATAGCAGAATTAGACACCCGCAGAAGTGAGATCTTAGGACGCTCAGCAAGCATTATCCAGCGGAAAATCCGCTCTTATTTGGCTCGCCAGAGTTTTGTCTCCCTTCGTTTGTCTGCTGTGCAGATACAAGCCGCATGCAGAGGACAACTTTCTCGGCATGTTTACGAGGGAATGCGGCAGCAGGCTTCTAGTTTGGTGATTCAGAGATATTTCCGCATGTATAACGCTAAGAAGGCATATGAAGAATTATATATGTCTGCTGTCTGTATTCAGACTGGTTTGCGGGTAATGGCTGCTCGTTGTGAGCTATGCTTTAGAAGGCGTACTAGAGCAGCGATTATCATTCAGAGCCATTGCAAGAAGTACTTGGCACAACTTGATTTTATGAAATTAAAGAAGGCAGCAATTGCAACACAATGTGCATGGAGAGGAAAAATGGCGAGGCGAGAACTGCGGAAACTCAAGATGGCTGCAAGAGAAACAGGAGCTCTCCAAGCTGCTAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGGTTGCAGCTGGAAAAACGTTTGAGGGTTGACATGGAAGAAGCGAAAACACGGGAAAATGAAAAATTACAATCTGCTTTGGATGAGATGCAACTTCAGTTTAAAGAAACTAAAGTACTTCTTGAAAAGGAGCAGGAGGCTGCTAAAAGAGCAATGGAGATTGTACCTGTCATACAGGAGGTTCCAGTTGTTGACCACTCTTTGTTGGAGAAGCTTAGTAGTGAAAATGAAAAACTTAAGAACTTGGTGAATTCACTGGAAAAGAAAATTGATGAAACAGAGAAAAGGTATGAAGAGGCAAACAGAATTGGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCAGAATCAAAAGTAATCCAGCTGAAGACTGCTATGCAAAGGCTTGAAGAGAAATTCTCAGATATCGAATCTGCAAACCATATTCTTCAGAAACAATCTCAGCTAAACTCATCTGTGAAAACAATAGCAGAACACATCGCAACACCTATAGATGAGAAGCTGGAAAATGGTCACCATGTCGTTGAAGAGCATAAAGCTGTTGAAATGTGTGTTACGCCTGTGAAACTATTTGGTACAGATTCTAACAGTAAATTGAGGAGGTCTTACATTGAACGACAACATGAGAATGTTGATTTACTTGTCAACTGTGTTATGAAAAATATTGGCTTCAATAATGAAAAGCCTATTGCTGCTTTTACCATTTACAAATGTCTTCTACACTGGAAATCATTTGAAGCCGAAAGAACTAATGTATTTGATCGCCTTATCCAGATGATTGGTTCTGCAATTGAGGATGAAGATGGAAATAATCTTATGGCCTATTGGTTGTCTAATACCTCTGCGTTATTATTTTTACTCGAACAAAGCCTTAAATCTCATGGTGCATCAACTGCTACCCCAGCTAAAAAACCACCTAATCCAACATCCCTCTTTGGAAGAATGACCAGGAGTTTTCTCTCATCCCCTTCTTCTGCAAACCTTGCCACCCCTGCATCGGAGGTTGTACGCAAGGTAGAGGCTAAATACCCGGCTTTACTTTTCAAGCAGCAGCTCACCGCCTATTTGGAGAAAATATATGGCATCATTCGGGACAACTTGAAGAAGGAGTTAACACCAATGCTTGCATTATGTATCCAGGCACCAAGAACATCAAAAGCAACGTTACGGTCTTCTGGTCGATCCTATGGTAAAGATTCTCCTATGGTTCACTGGCTGACTATTATCGAATCCCTCAACACCCTCCTCTGTACTCTGAAAGAGAACTTTGTGCCTCAAGTTCTTATCCAAAAGATTTTCAGTCAAACATTCTCGTATATTAATGTCCAACTCTTTAATAGTCTTCTTCTGCGCCGTGATTGTTGTACGTTCAGCAATGGGGAATATGTGAAAGCTGGATTAGCTGAATTAGAACTGTGGTGCTGTCAGGCCAAGGAAGAGTATGCGGGGTCATCTTGGGATGAGCTCAAGCACATAAGACAGGCTGTTGGATTCTTGGTAATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCTATCCTAAGTATCCAGCAGCTGTATAGAATATGCTCGCTTTACTGGGATGCTAACTACAATACTCGAAGCGTATCTCCTGATGTCCTTTCGAGCATGAGGATGCTTATGGTCGAGGACTCCAATAACGCTCAGAACGATTCTTTCTTGCTGGATGATAGCTCCAGCATTCCTTTCTCAGTGGATGACCTGTCTATATCACTGCAAGAGAAGGATTTCTCAGACATGAAACTGGCGGACGAACTTCTCGAGAATCCAGACTTCCAATTTTTAAATGAGTAG 4554 0.4067 MVAATTPIVGSHVWVEDSEVAWIDGEVLEVNGEEVKVSCTSGKTVVVKVSCIYHKDTEVPPSGVDDMTKLAYLHEPGVLENLRSRYDINEIYTYTGNILIAVNPFVKLPHLYDSHMMAQYKGAVFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPQEEIMKYKLGHPKTFHYLNQSNCYELEGIDEHKEYIATRRAMDVVGMSFEEQDAIFRVVAAILHLGNIEFMKGKEIDSSAPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYARLFDWLVDKINSSIGQDTDSKSLIGVLDIYGFESFNINSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSVCTINIKKFYIVIQXLDVTYQTDLFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQSLLETLSSTEPHYIRCVKPNNFLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPDALVGSSDEVQACKRILENVGLEGYQIGKTKVFLRAGQIAELDTRRSEILGRSASIIQRKIRSYLARQSFVSLRLSAVQIQAACRGQLSRHVYEGMRQQASSLVIQRYFRMYNAKKAYEELYMSAVCIQTGLRVMAARCELCFRRRTRAAIIIQSHCKKYLAQLDFMKLKKAAIATQCAWRGKMARRELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRVDMEEAKTRENEKLQSALDEMQLQFKETKVLLEKEQEAAKRAMEIVPVIQEVPVVDHSLLEKLSSENEKLKNLVNSLEKKIDETEKRYEEANRIGEERLKQALDAESKVIQLKTAMQRLEEKFSDIESANHILQKQSQLNSSVKTIAEHIATPIDEKLENGHHVVEEHKAVEMCVTPVKLFGTDSNSKLRRSYIERQHENVDLLVNCVMKNIGFNNEKPIAAFTIYKCLLHWKSFEAERTNVFDRLIQMIGSAIEDEDGNNLMAYWLSNTSALLFLLEQSLKSHGASTATPAKKPPNPTSLFGRMTRSFLSSPSSANLATPASEVVRKVEAKYPALLFKQQLTAYLEKIYGIIRDNLKKELTPMLALCIQAPRTSKATLRSSGRSYGKDSPMVHWLTIIESLNTLLCTLKENFVPQVLIQKIFSQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSIQQLYRICSLYWDANYNTRSVSPDVLSSMRMLMVEDSNNAQNDSFLLDDSSSIPFSVDDLSISLQEKDFSDMKLADELLENPDFQFLNE 1517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00042 1517 SMART DIL_2 1338 1445 IPR002710 -
Arst6g00042 1517 Coils Coil 977 1011 - -
Arst6g00042 1517 Pfam DIL domain 1339 1442 IPR002710 -
Arst6g00042 1517 CDD MYSc_Myo11 76 725 IPR036018 -
Arst6g00042 1517 ProSiteProfiles IQ motif profile. 859 888 IPR000048 GO:0005515
Arst6g00042 1517 CDD MyosinXI_CBD 1112 1486 IPR037975 GO:0007015
Arst6g00042 1517 Gene3D - 439 628 - -
Arst6g00042 1517 Coils Coil 882 955 - -
Arst6g00042 1517 Pfam IQ calmodulin-binding motif 791 808 IPR000048 GO:0005515
Arst6g00042 1517 Pfam IQ calmodulin-binding motif 742 760 IPR000048 GO:0005515
Arst6g00042 1517 Pfam IQ calmodulin-binding motif 766 783 IPR000048 GO:0005515
Arst6g00042 1517 Pfam IQ calmodulin-binding motif 837 854 IPR000048 GO:0005515
Arst6g00042 1517 Pfam IQ calmodulin-binding motif 861 880 IPR000048 GO:0005515
Arst6g00042 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 888 IPR027417 -
Arst6g00042 1517 Gene3D Kinesin motor domain 65 667 IPR036961 -
Arst6g00042 1517 ProSiteProfiles Dilute domain profile. 1161 1463 IPR002710 -
Arst6g00042 1517 Pfam Myosin head (motor domain) 64 725 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 790 IPR027417 -
Arst6g00042 1517 Gene3D - 671 738 - -
Arst6g00042 1517 SMART iq_5 762 784 IPR000048 GO:0005515
Arst6g00042 1517 SMART iq_5 739 761 IPR000048 GO:0005515
Arst6g00042 1517 SMART iq_5 858 880 IPR000048 GO:0005515
Arst6g00042 1517 SMART iq_5 835 857 IPR000048 GO:0005515
Arst6g00042 1517 SMART iq_5 787 809 IPR000048 GO:0005515
Arst6g00042 1517 ProSiteProfiles Myosin motor domain profile. 62 737 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 Gene3D Myosin VI head, motor domain, U50 subdomain 312 606 - -
Arst6g00042 1517 FunFam Myosin XI D 740 789 - -
Arst6g00042 1517 ProSiteProfiles IQ motif profile. 788 814 IPR000048 GO:0005515
Arst6g00042 1517 Pfam Myosin N-terminal SH3-like domain 9 49 IPR004009 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 ProSiteProfiles IQ motif profile. 763 792 IPR000048 GO:0005515
Arst6g00042 1517 FunFam Myosin 2 312 429 - -
Arst6g00042 1517 Gene3D - 740 789 - -
Arst6g00042 1517 Gene3D - 838 887 - -
Arst6g00042 1517 Gene3D - 790 837 - -
Arst6g00042 1517 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 SMART MYSc_2a 56 738 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 SMART MYSc_2a 56 738 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 ProSiteProfiles IQ motif profile. 742 769 IPR000048 GO:0005515
Arst6g00042 1517 Coils Coil 1019 1053 - -
Arst6g00042 1517 FunFam Myosin heavy chain 252 307 - -
Arst6g00042 1517 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Arst6g00042 1517 PANTHER MYOSIN 58 1451 - -
Arst6g00042 1517 PANTHER MYOSIN 58 1451 - -
Arst6g00042 1517 Gene3D - 252 310 - -
Arst6g00042 1517 FunFam unconventional myosin-Va 838 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00042 Arst-Chr6 553282 564366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00042 1 1516 Myosins gene family AT5G43900 73.421 0.0 2291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00042 K10357 - gmx:100795648 2610.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst6g00042 6 553282 564366 Arst6g00042 6 553282 564366 ECH
Arst6g00042 6 553282 564366 Arst6g00042 6 553282 564366 PCT
Arst6g00397 6 3647418 3655606 Arst6g00042 6 553282 564366 PCT