Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00030 ATGGATTCTCATAAACTAACGGCGCTTGTTGTTGATGATGATAGGATGGTTCGAATTATCCATGGAAAGATGTTGAACAGTGTTGGGGTGAAAAATCAAGTTGTGCAAAATGGTAAAGAAGCCATTAATGTTCATCTCTCTGGTCAAACCTTTGACCTAATTCTAATGGACCTGGATATGCCTATCATGAATGGCATCGAGGCAATAAAAGAACTTCGATCAATGGGAATTTGTAGCACCATTGCTGGTGTTTCAGCACGGTCAATGGAATCACATATTCAAGAATTTATGGAAGCAGGATTAGATGAATACTTAGAGAAGCCTCTTAATATTTCTAAGCTTACTTCATTCATTCACAAATTCTATGTTACAAATTAA 378 0.3651 MDSHKLTALVVDDDRMVRIIHGKMLNSVGVKNQVVQNGKEAINVHLSGQTFDLILMDLDMPIMNGIEAIKELRSMGICSTIAGVSARSMESHIQEFMEAGLDEYLEKPLNISKLTSFIHKFYVTN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00030 125 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 122 - -
Arst6g00030 125 Pfam Response regulator receiver domain 9 117 IPR001789 GO:0000160
Arst6g00030 125 CDD REC_hyHK_CKI1_RcsC-like 9 114 - -
Arst6g00030 125 SMART REC_2 6 118 IPR001789 GO:0000160
Arst6g00030 125 ProSiteProfiles Response regulatory domain profile. 7 122 IPR001789 GO:0000160
Arst6g00030 125 SUPERFAMILY CheY-like 4 121 IPR011006 -
Arst6g00030 125 Gene3D - 2 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst6g00030 Arst-Chr6 385628 386090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00030 6 122 Response Regulator Gene Family AT3G04280 40.336 5.98e-25 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Arst6g00030 Response_reg 1.9e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00030 - - rcu:8262779 162.925