Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst6g00011 ATGACTTCGTTCCTGAAGCCTGAGAATGCCCTCAAAAGGGCTGAAGAATTGATCAATGTTGGGCAGAAGCAGGATGCTCTGCAGACACTGCACGATCTTATTACCTCGAAAAGGTACAGGGCATGGCAGAAGACCCTCGAAAGGATTATGTTCAAGTATGTGGAACTCTGTGTAGACATGCGTAAGGGACGGTTTGCAAAGGACGGGCTCATTCAGTACCGTATCATATGCCAGCAAGTGAATGTTAGCTCCCTGGAGGAGGTTATCAAGCACTTCATGCACCTATCCACTGAAAAAGCTGAACAAGCCCGTAGCCAGGCACAGGCATTGGAAGAAGCTCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCAGAGGACTTGATGCTGAGCTATGTCAGTGGGGAGAAAGGAAAGGACAGATCTGATCGGGAGCTTGTTACCCCTTGGTTTAAATTTCTTTGGGAAACATATAGGACTGTGCTTGAAATATTGCGCAACAACTCAAAGCTAGAAACTTTATATGCTATGACTGCTCATCGGGCTTTTCAGTTTTGTAAGCAATATAAGCGAACCACAGAGTTCCGCAGACTATGCGAAATCATAAGAAACCATTTGGCCAATCTTAACAAGTATCGTGATCAACGTGACAGACCAGATCTTTCAGCTCCTGAGAGCTTGCAACTGTATCTGGATACAAGATTTGAGCAGCTGAAAATTGCAACAGAACTCGAACTTTGGCAGGAAGCTTTTAGATCTGTTGAAGATATACACGGACTGATGTGCTTGGTCAAGAAGACGCCGAAGCCATCTTTGATGGTTGTTTACTATGCTAAGTTGACAGAAATATTTTGGATAGGCTCAAGTCATCTATATCAAGCATATGCATGGTTCAGGCTATTTTTATTGCAAAAGAGCTTCAATAAGAATCTGAGTCAGAAGGATTTGCAATTAATAGCTTCATCAGTTGCTCTGGCTGCACTTTCGGTGCCTCCTCATGATCGCACTCATGGAGCATCTCATTTGGAACTAGAACATGAAAAGGAGAGAAATTTGAGGATGTCTAATCTTATTGGGTTTAATATGGAAACTAAACCTGAAAGCAGAGAAATGCTCTCAAGATCATCACTTCTTGCTGAACTGGCGTCCAAGGGCGTGATGTCTTGTGTAACCCAGGAAGTGAAGGATATTTACAACATTTTTGAACATGAATTCCTTCCTTCAGATCTTGCAGTAAAAGTGCAGCCCTTGTTGGCTAAAATATCAAAGTTAGGTGGTAAGCTTTCCACTGCTTCATCTGTCCCAGAAGTGCAGCTGTCTCAATACGTCCCTGCACTAGAAAAGTTAGCTACCTTGAGGTTGCTCCAGCAGGTGTCTAATGTGTACCAGAGTATGAAGATTGAGACCTTATCTGGCATGATCCCATTTTTTGATTTTTCTGTTGTGGAGAAGATTTCTGTTGATGCTGTTAAACAGAAGTTTCTTTCAATGAAAGTTGACCACATGAGAAATGTTGTAATTTTCTGCAAAATGGTATTTTTTAGATGTTTATCAATATTGTTTCTTGCTCAATTTACACTTGCTTACAGAGTTTTTTTTTTTCCTCCTTTTTTAGAGATTGGAGCTTTGCTTCCAACTTTGTCCGAGGTTGTTGCCAAGGAACATAAACGACTTCTAGCTCGAAAATCTATTATTGAGAAGAGGAAAGAAGAACAAGAGCGGCAGCTTCTGGAAATGGAGCGTGAGGAAGAATCAAAGAGGTTAAGAGTGCAGAAAATGAACGAAGAGGCTGAAAAATTGAGAGTTGCAACTGAATTTGAGCAGAGGAAAAATGAGAGGCTCCGCCAAGAGATAGAGGAAAGAGAAAAGGAAGAAGCTAAAGCTTTGTTTGAGGAAGCTGAGAAAAAATTTAAAAACATTAAGGGGAAAAAGCCACTTATTGAGGGGGATAAAATTACCAAGCAAGCCTTGATGGAATTGACGTTGAATGAACAACTCCGAGAAAGACAGGAAATGGAGAAAAAACTCCAAAAACTGGCAAAAACCATGGATTATTTGGAAAGGGCAAAAAGGGAAGAGGCTGCTCCCTTGATTCATGCTGCATATGTAAAGCGCCAAGAGGAAGAGAAGATTCTTCATGAGCATGAACAGCAGCAAGAGATTGAATTGAGTAGACAACGTCATGAAGGAGATCTCAAGGAGAAGGAGAGGCTTGCCAGAATGATTGGCAATAAAGAGATATATCAAGAGAAAGTTGTTAGTCGACGCCAGGCTGAATTTGACAGATTGAGGAAGGAAACGGAGGAACGGATCTCTAGGATATTACAGTCCAGGAAACAGGACCGGGAAAGATTGAGGAAGTGGAAGTATTATCTGAATGTGGAAGAAGAGAGGCAGCAAAAGTTGCGCGAGGAGGAAGAAGCAAGGAAGCGCGAAGAGGCTGAGAGGCGAAGGAAGGAAGAGGCTGAACGATTAGCAAAATTGGAAGAGATAGCAGAGAAACAGAGACAAAGAGAGCGGGAACTGGAAGAAAAGGAAAGACAAAGAAGAGAGGCATTGTTGGGAAGAGGTGCCGAGCCAGCTTCAAGGCCTACTGAGACTCCTGCACGCCCACTTGAGTCTGGATCTGCTGCTCCTGCTGCAGCTGCCGCTGCTGCTGCACCAGCCCCAGGGAAGTATGTCCCTAGGTTCCGCCGTGAGAAACCTGAGGGTGCAGCTGCTCCTCCTGAAACAGACCGCTGGAGTAACAGTAGCAGCCGGCCGGATGGTGACAGGTGGGGTCGTGGTGAAGATCGCAGATCAGCATTTGGTTCTGGTGTGGGTTCCAGGTCATCTTCAACCTGGTCATCCTCGAGGAACCCTCGTTAA 2868 0.4383 MTSFLKPENALKRAEELINVGQKQDALQTLHDLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLETLYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLANLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKPSLMVVYYAKLTEIFWIGSSHLYQAYAWFRLFLLQKSFNKNLSQKDLQLIASSVALAALSVPPHDRTHGASHLELEHEKERNLRMSNLIGFNMETKPESREMLSRSSLLAELASKGVMSCVTQEVKDIYNIFEHEFLPSDLAVKVQPLLAKISKLGGKLSTASSVPEVQLSQYVPALEKLATLRLLQQVSNVYQSMKIETLSGMIPFFDFSVVEKISVDAVKQKFLSMKVDHMRNVVIFCKMVFFRCLSILFLAQFTLAYRVFFFPPFLEIGALLPTLSEVVAKEHKRLLARKSIIEKRKEEQERQLLEMEREEESKRLRVQKMNEEAEKLRVATEFEQRKNERLRQEIEEREKEEAKALFEEAEKKFKNIKGKKPLIEGDKITKQALMELTLNEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIHAAYVKRQEEEKILHEHEQQQEIELSRQRHEGDLKEKERLARMIGNKEIYQEKVVSRRQAEFDRLRKETEERISRILQSRKQDRERLRKWKYYLNVEEERQQKLREEEEARKREEAERRRKEEAERLAKLEEIAEKQRQRERELEEKERQRREALLGRGAEPASRPTETPARPLESGSAAPAAAAAAAAPAPGKYVPRFRREKPEGAAAPPETDRWSNSSSRPDGDRWGRGEDRRSAFGSGVGSRSSSTWSSSRNPR 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst6g00011 955 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Arst6g00011 955 Pfam PCI domain 373 508 IPR000717 -
Arst6g00011 955 Gene3D UVR domain 217 268 - -
Arst6g00011 955 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 933 IPR027512 GO:0005852
Arst6g00011 955 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Arst6g00011 955 Coils Coil 555 643 - -
Arst6g00011 955 Gene3D - 351 495 - -
Arst6g00011 955 Gene3D - 269 342 - -
Arst6g00011 955 MobiDBLite consensus disorder prediction 938 955 - -
Arst6g00011 955 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Arst6g00011 955 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 950 IPR027512 GO:0005852
Arst6g00011 955 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 950 IPR027512 GO:0005852
Arst6g00011 955 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Arst6g00011 955 MobiDBLite consensus disorder prediction 797 955 - -
Arst6g00011 955 Coils Coil 655 692 - -
Arst6g00011 955 Coils Coil 93 120 - -
Arst6g00011 955 MobiDBLite consensus disorder prediction 797 856 - -
Arst6g00011 955 Coils Coil 791 851 - -
Arst6g00011 955 MobiDBLite consensus disorder prediction 917 932 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst6g00011 1 939 Eukaryotic Initiation Factors Gene Family AT4G11420 67.579 0.0 1228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst6g00011 K03254 - gmx:100803796 1336.24